RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 MS4A14Q96JA4 679 aa15.08■□□□□ 0
LDB3-204ENST00000372066 NAP1L3Q99457 506 aaPredicted RBP15.08■□□□□ 0
LDB3-204ENST00000372066 CARD9Q9H257 536 aa15.08■□□□□ 0
LDB3-204ENST00000372066 PDE11AQ9HCR9 933 aa15.08■□□□□ 0
LDB3-204ENST00000372066 SEPT11Q9NVA2 429 aaKnown RBP15.08■□□□□ 0
LDB3-204ENST00000372066 DMGDHQ9UI17 866 aaKnown RBP15.08■□□□□ 0
LDB3-204ENST00000372066 NOCTQ9UK39 431 aaKnown RBP15.08■□□□□ 0
LDB3-204ENST00000372066 HPCAL4Q9UM19 191 aa15.08■□□□□ 0
LDB3-204ENST00000372066 GSTTP1A0A1W2PQM5 241 aa15.07■□□□□ 0
LDB3-204ENST00000372066 ARHGEF15O94989 841 aa15.07■□□□□ 0
LDB3-204ENST00000372066 BMP1P13497 986 aa15.07■□□□□ 0
LDB3-204ENST00000372066 POU3F3P20264 500 aaPredicted RBP15.07■□□□□ 0
LDB3-204ENST00000372066 ATP4AP20648 1035 aa15.07■□□□□ 0
LDB3-204ENST00000372066 COL9A1P20849 921 aa15.07■□□□□ 0
LDB3-204ENST00000372066 MATR3P43243 847 aaKnown RBP eCLIP15.07■□□□□ 0
LDB3-204ENST00000372066 PSEN2P49810 448 aa15.07■□□□□ 0
LDB3-204ENST00000372066 PDE6CP51160 858 aa15.07■□□□□ 0
LDB3-204ENST00000372066 GPC5P78333 572 aa15.07■□□□□ 0
LDB3-204ENST00000372066 GPNMBQ14956 572 aa15.07■□□□□ 0
LDB3-204ENST00000372066 C15orf39Q6ZRI6 1047 aa15.07■□□□□ 0
LDB3-204ENST00000372066 LRRC8DQ7L1W4 858 aa15.07■□□□□ 0
LDB3-204ENST00000372066 HELQQ8TDG4 1101 aa15.07■□□□□ 0
LDB3-204ENST00000372066 PSPC1Q8WXF1 523 aaKnown RBP15.07■□□□□ 0
LDB3-204ENST00000372066 CCDC127Q96BQ5 260 aa15.07■□□□□ 0
LDB3-204ENST00000372066 KREMEN1Q96MU8 473 aa15.07■□□□□ 0
LDB3-204ENST00000372066 CEP89Q96ST8 783 aa15.07■□□□□ 0
LDB3-204ENST00000372066 ZBED2Q9BTP6 218 aa15.07■□□□□ 0
LDB3-204ENST00000372066 GDF3Q9NR23 364 aa15.07■□□□□ 0
LDB3-204ENST00000372066 C1orf112Q9NSG2 853 aa15.07■□□□□ 0
LDB3-204ENST00000372066 EHD2Q9NZN4 543 aa15.07■□□□□ 0
LDB3-204ENST00000372066 GTF2IRD1Q9UHL9 959 aa15.07■□□□□ 0
LDB3-204ENST00000372066 PACSIN2Q9UNF0 486 aaPredicted RBP15.07■□□□□ 0
LDB3-204ENST00000372066 CEP104O60308 925 aa15.07■□□□□ 0
LDB3-204ENST00000372066 BUB1BO60566 1050 aaPredicted RBP15.07■□□□□ 0
LDB3-204ENST00000372066 CKBP12277 381 aa15.07■□□□□ 0
LDB3-204ENST00000372066 GLRA2P23416 452 aa15.07■□□□□ 0
LDB3-204ENST00000372066 STAT5BP51692 787 aa15.07■□□□□ 0
LDB3-204ENST00000372066 EFNA5P52803 228 aa15.07■□□□□ 0
LDB3-204ENST00000372066 SV2AQ7L0J3 742 aa15.07■□□□□ 0
LDB3-204ENST00000372066 ZNF677Q86XU0 584 aa15.07■□□□□ 0
LDB3-204ENST00000372066 METTL13Q8N6R0 699 aa15.07■□□□□ 0
LDB3-204ENST00000372066 ZSWIM2Q8NEG5 633 aa15.07■□□□□ 0
LDB3-204ENST00000372066 TCP11Q8WWU5 503 aa15.07■□□□□ 0
LDB3-204ENST00000372066 EMID1Q96A84 441 aaPredicted RBP15.07■□□□□ 0
LDB3-204ENST00000372066 NECAB3Q96P71 396 aaPredicted RBP15.07■□□□□ 0
LDB3-204ENST00000372066 JPH2Q9BR39 696 aaPredicted RBP15.07■□□□□ 0
LDB3-204ENST00000372066 KATNAL1Q9BW62 490 aa15.07■□□□□ 0
LDB3-204ENST00000372066 SLITRK6Q9H5Y7 841 aa15.07■□□□□ 0
LDB3-204ENST00000372066 SUGCTQ9HAC7 445 aa15.07■□□□□ 0
LDB3-204ENST00000372066 ST7Q9NRC1 585 aa15.07■□□□□ 0
LDB3-204ENST00000372066 PSD3Q9NYI0 1048 aa15.07■□□□□ 0
LDB3-204ENST00000372066 H3BQF6 201 aa15.06■□□□□ 0
LDB3-204ENST00000372066 K7ERI5 159 aa15.06■□□□□ 0
LDB3-204ENST00000372066 HEXIM1O94992 359 aaKnown RBP15.06■□□□□ 0
LDB3-204ENST00000372066 PARNO95453 639 aaKnown RBP15.06■□□□□ 0
LDB3-204ENST00000372066 BPIFB4P59827 614 aa15.06■□□□□ 0
LDB3-204ENST00000372066 WDR5P61964 334 aaKnown RBP15.06■□□□□ 0
LDB3-204ENST00000372066 CDR2Q01850 454 aa15.06■□□□□ 0
LDB3-204ENST00000372066 MFSD10Q14728 455 aa15.06■□□□□ 0
LDB3-204ENST00000372066 PPP1R2P3Q6NXS1 205 aa15.06■□□□□ 0
LDB3-204ENST00000372066 ZPBP2Q6X784 338 aa15.06■□□□□ 0
LDB3-204ENST00000372066 TMCO2Q7Z6W1 182 aaPredicted RBP15.06■□□□□ 0
LDB3-204ENST00000372066 GOLGA6L1Q8N7Z2 621 aa15.06■□□□□ 0
LDB3-204ENST00000372066 PPTC7Q8NI37 304 aa15.06■□□□□ 0
LDB3-204ENST00000372066 SLC20A1Q8WUM9 679 aa15.06■□□□□ 0
LDB3-204ENST00000372066 BBXQ8WY36 941 aaPredicted RBP15.06■□□□□ 0
LDB3-204ENST00000372066 SEMA4DQ92854 862 aa15.06■□□□□ 0
LDB3-204ENST00000372066 EXOC4Q96A65 974 aa15.06■□□□□ 0
LDB3-204ENST00000372066 PKNOX2Q96KN3 472 aa15.06■□□□□ 0
LDB3-204ENST00000372066 FNBP1Q96RU3 617 aa15.06■□□□□ 0
LDB3-204ENST00000372066 RPS6KC1Q96S38 1066 aa15.06■□□□□ 0
LDB3-204ENST00000372066 FAM213AQ9BRX8 229 aa15.06■□□□□ 0
LDB3-204ENST00000372066 THAP2Q9H0W7 228 aa15.06■□□□□ 0
LDB3-204ENST00000372066 AZI2Q9H6S1 392 aa15.06■□□□□ 0
LDB3-204ENST00000372066 SMARCAL1Q9NZC9 954 aa15.06■□□□□ 0
LDB3-204ENST00000372066 AGO2Q9UKV8 859 aaKnown RBP15.06■□□□□ 0
LDB3-204ENST00000372066 NOC2LQ9Y3T9 749 aaKnown RBP15.06■□□□□ 0
LDB3-204ENST00000372066 SCN10AQ9Y5Y9 1956 aa15.06■□□□□ 0
LDB3-204ENST00000372066 CHD7Q9P2D1 2997 aa15.05■□□□□ -0
LDB3-204ENST00000372066 LRRIQ4A6NIV6 560 aa15.05■□□□□ -0
LDB3-204ENST00000372066 POLR3GO15318 223 aaPredicted RBP15.05■□□□□ -0
LDB3-204ENST00000372066 SORBS3O60504 671 aa15.05■□□□□ -0
LDB3-204ENST00000372066 NBNO60934 754 aa15.05■□□□□ -0
LDB3-204ENST00000372066 MAFO75444 373 aaPredicted RBP15.05■□□□□ -0
LDB3-204ENST00000372066 LGR5O75473 907 aa15.05■□□□□ -0
LDB3-204ENST00000372066 GGPS1O95749 300 aa15.05■□□□□ -0
LDB3-204ENST00000372066 FTLP02792 175 aaPredicted RBP15.05■□□□□ -0
LDB3-204ENST00000372066 ZNF286BP0CG31 522 aa15.05■□□□□ -0
LDB3-204ENST00000372066 ABCB4P21439 1286 aa15.05■□□□□ -0
LDB3-204ENST00000372066 USP8P40818 1118 aa15.05■□□□□ -0
LDB3-204ENST00000372066 SLC26A2P50443 739 aa15.05■□□□□ -0
LDB3-204ENST00000372066 KCNQ1P51787 676 aa15.05■□□□□ -0
LDB3-204ENST00000372066 AP3M2P53677 418 aa15.05■□□□□ -0
LDB3-204ENST00000372066 PTK7Q13308 1070 aa15.05■□□□□ -0
LDB3-204ENST00000372066 PRPF4BQ13523 1007 aaKnown RBP15.05■□□□□ -0
LDB3-204ENST00000372066 ZACNQ401N2 412 aa15.05■□□□□ -0
LDB3-204ENST00000372066 WDR44Q5JSH3 913 aa15.05■□□□□ -0
LDB3-204ENST00000372066 IER5Q5VY09 327 aa15.05■□□□□ -0
LDB3-204ENST00000372066 CNKSR3Q6P9H4 555 aa15.05■□□□□ -0
LDB3-204ENST00000372066 NOP9Q86U38 636 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms