RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 AP3M2P53677 418 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 LAMTOR4Q0VGL1 99 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 KCNMA1Q12791 1236 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 BFSP1Q12934 665 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 STRN3Q13033 797 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 DRP2Q13474 957 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 CAPSQ13938 189 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 SYCP1Q15431 976 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 SURF1Q15526 300 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 LLGL2Q6P1M3 1020 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 HFE2Q6ZVN8 426 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 SRGAP1Q7Z6B7 1085 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 ZBTB8OSQ8IWT0 167 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 EFHBQ8N7U6 833 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 ZNF397Q8NF99 534 aaPredicted RBP9.51□□□□□ -0.89
SNX27-201ENST00000368838 ASAP3Q8TDY4 903 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 PRPF31Q8WWY3 499 aaKnown RBP9.51□□□□□ -0.89
SNX27-201ENST00000368838 RPGRIP1Q96KN7 1286 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 FAM81BQ96LP2 452 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 CWH43Q9H720 699 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 PTPRHQ9HD43 1115 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 TLR9Q9NR96 1032 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 C1orf112Q9NSG2 853 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 RNF19AQ9NV58 838 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 HSPBP1Q9NZL4 362 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 CEP72Q9P209 647 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 PRKAG3Q9UGI9 489 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 CDH22Q9UJ99 828 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 TNFSF13BQ9Y275 285 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 USP15Q9Y4E8 981 aaPredicted RBP9.51□□□□□ -0.89
SNX27-201ENST00000368838 DOCK6Q96HP0 2047 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 ATP8B3O60423 1300 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 SSU72P8A0A1W2PR75 194 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 TTC26A0AVF1 554 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 CCDC169A6NNP5 214 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 KIF2AO00139 706 aaPredicted RBP9.5□□□□□ -0.89
SNX27-201ENST00000368838 ABLIM1O14639 778 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 EXTL3O43909 919 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 EXOC3O60645 756 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 ZC3H11AO75152 810 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNX27-201ENST00000368838 ADRB2P07550 413 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 TRIM21P19474 475 aaKnown RBP9.5□□□□□ -0.89
SNX27-201ENST00000368838 CASP14P31944 242 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 CA8P35219 290 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 CASP4P49662 377 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 GUCA2AQ02747 115 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 CETN1Q12798 172 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 DSC3Q14574 896 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 MAPK6Q16659 721 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 SLC39A4Q6P5W5 647 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 C15orf39Q6ZRI6 1047 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 ALYREFQ86V81 257 aaKnown RBP9.5□□□□□ -0.89
SNX27-201ENST00000368838 CCDC170Q8IYT3 715 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 GPD1LQ8N335 351 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 TATDN2Q93075 761 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 PPP2R3CQ969Q6 453 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 JAKMIP2Q96AA8 810 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 TSPAN18Q96SJ8 248 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 MAP7D2Q96T17 732 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 BAG1Q99933 345 aaPredicted RBP9.5□□□□□ -0.89
SNX27-201ENST00000368838 MRPL4Q9BYD3 311 aaKnown RBP9.5□□□□□ -0.89
SNX27-201ENST00000368838 ADAMTS10Q9H324 1103 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 ENTPD7Q9NQZ7 604 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 ABHD10Q9NUJ1 306 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 PRMT7Q9NVM4 692 aaPredicted RBP9.5□□□□□ -0.89
SNX27-201ENST00000368838 TMEM161AQ9NX61 479 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 AIPL1Q9NZN9 384 aa9.5□□□□□ -0.89
SNX27-201ENST00000368838 SUCLA2Q9P2R7 463 aaPredicted RBP9.5□□□□□ -0.89
SNX27-201ENST00000368838 MTCL1Q9Y4B5 1905 aaKnown RBP9.5□□□□□ -0.89
SNX27-201ENST00000368838 DENND4AQ7Z401 1863 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 PIEZO1Q92508 2521 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 CARNS1A5YM72 827 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 HIDE1A8MVS5 230 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 NT5C1B-RDH14C9J2C7 533 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 HNRNPDLO14979 420 aaKnown RBP9.49□□□□□ -0.89
SNX27-201ENST00000368838 GFPT2O94808 682 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 LCA5LO95447 670 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 KRT13P13646 458 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 ZSCAN20P17040 1043 aaPredicted RBP9.49□□□□□ -0.89
SNX27-201ENST00000368838 KRT9P35527 623 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 PRKCIP41743 596 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 PHKA2P46019 1235 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 FMO5P49326 533 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 GPC3P51654 580 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 VAMP7P51809 220 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 FAM189BP81408 668 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 MCL1Q07820 350 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 PSMD6Q15008 389 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 SNRNP35Q16560 246 aaKnown RBP9.49□□□□□ -0.89
SNX27-201ENST00000368838 HSP90AA4PQ58FG1 418 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 CLLU1OSQ5K130 101 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 CYP26C1Q6V0L0 522 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 GBP6Q6ZN66 633 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 KSR1Q8IVT5 923 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 ABI1Q8IZP0 508 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 SMRP1Q8NCR6 262 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 HELQQ8TDG4 1101 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 PARD3BQ8TEW8 1205 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 BAP1Q92560 729 aa9.49□□□□□ -0.89
SNX27-201ENST00000368838 LPPQ93052 612 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms