RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 FAM43BQ6ZT52 329 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-204ENST00000368210 CDKL3Q8IVW4 592 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-204ENST00000368210 KIRREL3Q8IZU9 778 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 OR6J1Q8NGC5 347 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 ZKSCAN4Q969J2 545 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-204ENST00000368210 TNIP3Q96KP6 325 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 GPRC5CQ9NQ84 441 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 TRAF3IP3Q9Y228 551 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 CAPN6Q9Y6Q1 641 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 MAGEA13PA6NCF6 341 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 ASAP2O43150 1006 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 MCF2P10911 925 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 ACADSP16219 412 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 HIF1AQ16665 826 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 TAF1BQ53T94 588 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-204ENST00000368210 IER5Q5VY09 327 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 C1orf228Q6PIY5 440 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 JAMLQ86YT9 394 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 AGGF1Q8N302 714 aaeCLIP13.95□□□□□ -0.18
PTPRK-204ENST00000368210 MYO5BQ9ULV0 1848 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 FOXN3O00409 490 aaPredicted RBP13.95□□□□□ -0.18
PTPRK-204ENST00000368210 HNRNPCL1O60812 293 aaKnown RBP13.95□□□□□ -0.18
PTPRK-204ENST00000368210 PDGFRAP16234 1089 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 EIF3EP60228 445 aaKnown RBP13.95□□□□□ -0.18
PTPRK-204ENST00000368210 STAT4Q14765 748 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 EPC2Q52LR7 807 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 LRRC71Q8N4P6 559 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 KIAA0895Q8NCT3 520 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 ATP6V1E2Q96A05 226 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 SEC16BQ96JE7 1060 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 SPON1Q9HCB6 807 aa13.95□□□□□ -0.18
PTPRK-204ENST00000368210 DDX4Q9NQI0 724 aaKnown RBP13.95□□□□□ -0.18
PTPRK-204ENST00000368210 ITIH2P19823 946 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 NCF2P19878 526 aaPredicted RBP13.94□□□□□ -0.18
PTPRK-204ENST00000368210 ROR2Q01974 943 aaKnown RBP13.94□□□□□ -0.18
PTPRK-204ENST00000368210 KPNB1Q14974 876 aaKnown RBP13.94□□□□□ -0.18
PTPRK-204ENST00000368210 TMEM132DQ14C87 1099 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 RYBPQ8N488 228 aaPredicted RBP13.94□□□□□ -0.18
PTPRK-204ENST00000368210 TPCN2Q8NHX9 752 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 SCFD2Q8WU76 684 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 GRAMD1AQ96CP6 724 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 CYFIP2Q96F07 1278 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 PIN4Q9Y237 131 aaKnown RBP13.94□□□□□ -0.18
PTPRK-204ENST00000368210 FIS1Q9Y3D6 152 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 RIC1Q4ADV7 1423 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 CCDC15Q0P6D6 951 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 MED21Q13503 144 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 DDX42Q86XP3 938 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTPRK-204ENST00000368210 DHX38Q92620 1227 aaKnown RBP13.94□□□□□ -0.18
PTPRK-204ENST00000368210 ITFG2Q969R8 447 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 THAP11Q96EK4 314 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 MCEEQ96PE7 176 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 OSBPL8Q9BZF1 889 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 MAP3K20Q9NYL2 800 aaKnown RBP13.94□□□□□ -0.18
PTPRK-204ENST00000368210 SMIM22K7EJ46 135 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 AKAP3O75969 853 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 GH1P01241 217 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 PMLP29590 882 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 HSPA9P38646 679 aaKnown RBP13.94□□□□□ -0.18
PTPRK-204ENST00000368210 PIGHQ14442 188 aaPredicted RBP13.94□□□□□ -0.18
PTPRK-204ENST00000368210 STILQ15468 1287 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 ATF7IP2Q5U623 682 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 TGS1Q96RS0 853 aaKnown RBP13.94□□□□□ -0.18
PTPRK-204ENST00000368210 EHD2Q9NZN4 543 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 BFARQ9NZS9 450 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 PPARGC1AQ9UBK2 798 aaKnown RBP13.94□□□□□ -0.18
PTPRK-204ENST00000368210 GTF3C4Q9UKN8 822 aa13.94□□□□□ -0.18
PTPRK-204ENST00000368210 NME3Q13232 169 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 SNAPC2Q13487 334 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 ZNF677Q86XU0 584 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 CBWD2Q8IUF1 395 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 CATSPER2Q96P56 530 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 THAP2Q9H0W7 228 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 ARHGAP20Q9P2F6 1191 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 EPHB1P54762 984 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 GJC2Q5T442 439 aaPredicted RBP13.93□□□□□ -0.18
PTPRK-204ENST00000368210 LRIG3Q6UXM1 1119 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 TRMT10CQ7L0Y3 403 aaKnown RBP13.93□□□□□ -0.18
PTPRK-204ENST00000368210 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.93□□□□□ -0.181e-6■■■■■ 67.5
PTPRK-204ENST00000368210 CCDC138Q96M89 665 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 CBWD1Q9BRT8 395 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 ERP44Q9BS26 406 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 CELF4Q9BZC1 486 aaKnown RBP13.93□□□□□ -0.18
PTPRK-204ENST00000368210 NDEL1Q9GZM8 345 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 NIF3L1Q9GZT8 377 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 CHORDC1Q9UHD1 332 aaPredicted RBP13.93□□□□□ -0.18
PTPRK-204ENST00000368210 ANGPTL3Q9Y5C1 460 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 DYNC1LI2O43237 492 aaPredicted RBP13.93□□□□□ -0.18
PTPRK-204ENST00000368210 HOXA10P31260 410 aaPredicted RBP13.93□□□□□ -0.18
PTPRK-204ENST00000368210 CDC42EP1Q00587 391 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 ZNF720Q7Z2F6 126 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 PNMA5Q96PV4 448 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 RBM15Q96T37 977 aaKnown RBP eCLIP13.93□□□□□ -0.181e-15■□□□□ 9.9
PTPRK-204ENST00000368210 TTC1Q99614 292 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 VPS11Q9H270 941 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 HBP1O60381 514 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 HSPA4LO95757 839 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 AGTP01019 485 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 BACE1P56817 501 aa13.93□□□□□ -0.18
PTPRK-204ENST00000368210 COL9A3Q14050 684 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms