RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 HAUS6Q7Z4H7 955 aa16.15■□□□□ 0.18
VAMP4-202ENST00000367740 CHFRQ96EP1 664 aa16.15■□□□□ 0.18
VAMP4-202ENST00000367740 DYDC2Q96IM9 177 aa16.15■□□□□ 0.18
VAMP4-202ENST00000367740 UROC1Q96N76 676 aa16.15■□□□□ 0.18
VAMP4-202ENST00000367740 C22orf23Q9BZE7 217 aa16.15■□□□□ 0.18
VAMP4-202ENST00000367740 PRMT7Q9NVM4 692 aaPredicted RBP16.15■□□□□ 0.18
VAMP4-202ENST00000367740 PTPRDP23468 1912 aa16.14■□□□□ 0.17
VAMP4-202ENST00000367740 M0R2N6 131 aa16.14■□□□□ 0.17
VAMP4-202ENST00000367740 N4BP3O15049 544 aa16.14■□□□□ 0.17
VAMP4-202ENST00000367740 RNF40O75150 1001 aa16.14■□□□□ 0.17
VAMP4-202ENST00000367740 IRX4P78413 519 aa16.14■□□□□ 0.17
VAMP4-202ENST00000367740 SIM1P81133 766 aaPredicted RBP16.14■□□□□ 0.17
VAMP4-202ENST00000367740 CYP4A11Q02928 519 aa16.14■□□□□ 0.17
VAMP4-202ENST00000367740 MRPL58Q14197 206 aaKnown RBP16.14■□□□□ 0.17
VAMP4-202ENST00000367740 EPHA7Q15375 998 aa16.14■□□□□ 0.17
VAMP4-202ENST00000367740 POLR3FQ9H1D9 316 aaPredicted RBP16.14■□□□□ 0.17
VAMP4-202ENST00000367740 SLC32A1Q9H598 525 aa16.14■□□□□ 0.17
VAMP4-202ENST00000367740 ZSWIM4Q9H7M6 989 aa16.14■□□□□ 0.17
VAMP4-202ENST00000367740 CACNA2D2Q9NY47 1150 aa16.14■□□□□ 0.17
VAMP4-202ENST00000367740 AFF4Q9UHB7 1163 aaKnown RBP16.14■□□□□ 0.17
VAMP4-202ENST00000367740 GDAQ9Y2T3 454 aa16.14■□□□□ 0.17
VAMP4-202ENST00000367740 YIPF1Q9Y548 306 aa16.14■□□□□ 0.17
VAMP4-202ENST00000367740 LRRIQ4A6NIV6 560 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 CYSRT1A8MQ03 144 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 MEFVO15553 781 aaPredicted RBP16.13■□□□□ 0.17
VAMP4-202ENST00000367740 DGAT1O75907 488 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 PRAMEF12O95522 483 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 GBP1P32455 592 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 NLRP5P59047 1200 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 SOX4Q06945 474 aaPredicted RBP16.13■□□□□ 0.17
VAMP4-202ENST00000367740 NTRK3Q16288 839 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 FAM187BQ17R55 369 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 ITPRIPL2Q3MIP1 535 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 ADCK5Q3MIX3 580 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 CDCA2Q69YH5 1023 aaPredicted RBP16.13■□□□□ 0.17
VAMP4-202ENST00000367740 CYP2U1Q7Z449 544 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 PIP4P1Q86T03 277 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 CHCHD4Q8N4Q1 142 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 FAM20AQ96MK3 541 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 RNF26Q9BY78 433 aaPredicted RBP16.13■□□□□ 0.17
VAMP4-202ENST00000367740 DNAJC25Q9H1X3 360 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 FZD8Q9H461 694 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 OBP2AQ9NY56 170 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 EBF1Q9UH73 591 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 PCDHA4Q9UN74 947 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 ACACAQ13085 2346 aa16.13■□□□□ 0.17
VAMP4-202ENST00000367740 APC2O95996 2303 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 ADAMTS9Q9P2N4 1935 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 PLXNB3Q9ULL4 1909 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 CCDC194A0A1B0GVG4 234 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 H7C4K7 107 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 DPYSL4O14531 572 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 SYN3O14994 580 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 SEC24BO95487 1268 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 EGFP01133 1207 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 EDN1P05305 212 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 PLCB2Q00722 1185 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 AKAP17AQ02040 695 aaKnown RBP16.12■□□□□ 0.17
VAMP4-202ENST00000367740 SCAPQ12770 1279 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 GRSF1Q12849 480 aaKnown RBP eCLIP16.12■□□□□ 0.17
VAMP4-202ENST00000367740 CTXN3Q4LDR2 81 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 EEF1DP3Q658K8 133 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 NCAPH2Q6IBW4 605 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 RNF19BQ6ZMZ0 732 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 SLC26A6Q9BXS9 759 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 SH3GLB2Q9NR46 395 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 INVSQ9Y283 1065 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 USP20Q9Y2K6 914 aa16.12■□□□□ 0.17
VAMP4-202ENST00000367740 EIF4E1BA6NMX2 242 aaKnown RBP16.11■□□□□ 0.17
VAMP4-202ENST00000367740 H0Y626 953 aa16.11■□□□□ 0.17
VAMP4-202ENST00000367740 TRDMT1O14717 391 aaKnown RBP16.11■□□□□ 0.17
VAMP4-202ENST00000367740 TRIM16O95361 564 aa16.11■□□□□ 0.17
VAMP4-202ENST00000367740 VNN2O95498 520 aa16.11■□□□□ 0.17
VAMP4-202ENST00000367740 APBB3O95704 486 aa16.11■□□□□ 0.17
VAMP4-202ENST00000367740 PI4KAP42356 2102 aa16.11■□□□□ 0.17
VAMP4-202ENST00000367740 INF2Q27J81 1249 aa16.11■□□□□ 0.17
VAMP4-202ENST00000367740 GAREM2Q75VX8 874 aa16.11■□□□□ 0.17
VAMP4-202ENST00000367740 GLIS3Q8NEA6 775 aa16.11■□□□□ 0.17
VAMP4-202ENST00000367740 BPIFB1Q8TDL5 484 aa16.11■□□□□ 0.17
VAMP4-202ENST00000367740 HAS1Q92839 578 aa16.11■□□□□ 0.17
VAMP4-202ENST00000367740 ADPGKQ9BRR6 497 aa16.11■□□□□ 0.17
VAMP4-202ENST00000367740 GPRC5CQ9NQ84 441 aa16.11■□□□□ 0.17
VAMP4-202ENST00000367740 EVLQ9UI08 416 aaPredicted RBP16.11■□□□□ 0.17
VAMP4-202ENST00000367740 MAFFQ9ULX9 164 aa16.11■□□□□ 0.17
VAMP4-202ENST00000367740 DENND4CQ5VZ89 1909 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 CFAP46Q8IYW2 2715 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 OTOL1A6NHN0 477 aaPredicted RBP16.1■□□□□ 0.17
VAMP4-202ENST00000367740 PODXLO00592 558 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 SLITRK3O94933 977 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 BCKDHBP21953 392 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 MAPK8P45983 427 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 SEMA3BQ13214 749 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 PRPF4BQ13523 1007 aaKnown RBP16.1■□□□□ 0.17
VAMP4-202ENST00000367740 NPY5RQ15761 445 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 ZNF280DQ6N043 979 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 SYT13Q7L8C5 426 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 RAB44Q7Z6P3 723 aaPredicted RBP16.1■□□□□ 0.17
VAMP4-202ENST00000367740 TPH2Q8IWU9 490 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 BLIDQ8IZY5 108 aa16.1■□□□□ 0.17
VAMP4-202ENST00000367740 RPLP0P6Q8NHW5 317 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms