RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 HNRNPCL1O60812 293 aaKnown RBP12.06□□□□□ -0.48
RD3-201ENST00000367002 CHEK2O96017 543 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 TXNP10599 105 aaKnown RBP12.06□□□□□ -0.48
RD3-201ENST00000367002 RRM1P23921 792 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 CCND1P24385 295 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 ERVK-9P63128 1117 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 DEUP1Q05D60 604 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 TMTC4Q5T4D3 741 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 SCG3Q8WXD2 468 aaKnown RBP12.06□□□□□ -0.48
RD3-201ENST00000367002 CD248Q9HCU0 757 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 MROH1Q8NDA8 1641 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 STX3Q13277 289 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 PTK7Q13308 1070 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 MXD4Q14582 209 aaPredicted RBP12.06□□□□□ -0.48
RD3-201ENST00000367002 ANO5Q75V66 913 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 SCN4BQ8IWT1 228 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 OR6P1Q8NGX9 317 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 TAS1R2Q8TE23 839 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 SLC20A1Q8WUM9 679 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 SLC35C1Q96A29 364 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 PGBD4Q96DM1 585 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 PRMT6Q96LA8 375 aaPredicted RBP12.06□□□□□ -0.48
RD3-201ENST00000367002 MRPL46Q9H2W6 279 aaKnown RBP12.06□□□□□ -0.48
RD3-201ENST00000367002 PPCSQ9HAB8 311 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 OLFML3Q9NRN5 406 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 LOC102724159A0A0B4J2E5 919 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 GTPBP10A4D1E9 387 aaKnown RBP12.06□□□□□ -0.48
RD3-201ENST00000367002 EXTL3O43909 919 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 APOEP02649 317 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 PAPOLAP51003 745 aaKnown RBP12.06□□□□□ -0.48
RD3-201ENST00000367002 HIC1Q14526 733 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 PWP2Q15269 919 aaKnown RBP12.06□□□□□ -0.48
RD3-201ENST00000367002 CDR2LQ86X02 465 aaPredicted RBP12.06□□□□□ -0.48
RD3-201ENST00000367002 RIBC1Q8N443 379 aaPredicted RBP12.06□□□□□ -0.48
RD3-201ENST00000367002 ARMC2Q8NEN0 867 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 ABTB1Q969K4 478 aaPredicted RBP12.06□□□□□ -0.48
RD3-201ENST00000367002 NIF3L1Q9GZT8 377 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 CDC42EP4Q9H3Q1 356 aaKnown RBP12.06□□□□□ -0.48
RD3-201ENST00000367002 NOD2Q9HC29 1040 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 SUN2Q9UH99 717 aa12.06□□□□□ -0.48
RD3-201ENST00000367002 MROH2AA6NES4 1674 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 A0A0A6YYK5 440 aaPredicted RBP12.05□□□□□ -0.48
RD3-201ENST00000367002 H3BRJ5 948 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 LCP1P13796 627 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 PHEXP78562 749 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 LRRC36Q1X8D7 754 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 FOXR1Q6PIV2 292 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 RNF135Q8IUD6 432 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 RNF168Q8IYW5 571 aaPredicted RBP12.05□□□□□ -0.48
RD3-201ENST00000367002 ATG4CQ96DT6 458 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 POP1Q99575 1024 aaKnown RBP12.05□□□□□ -0.48
RD3-201ENST00000367002 EHD4Q9H223 541 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 TRAF3IP3Q9Y228 551 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 RNF103-CHMP3A0A140T963 221 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 DDTLA6NHG4 134 aaPredicted RBP12.05□□□□□ -0.48
RD3-201ENST00000367002 B2RBV5 119 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 TMEM259Q4ZIN3 620 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 SEZ6Q53EL9 994 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 FASTKD1Q53R41 847 aaKnown RBP12.05□□□□□ -0.48
RD3-201ENST00000367002 RASSF3Q86WH2 238 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 ZNF280CQ8ND82 737 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 C1orf131Q8NDD1 294 aaKnown RBP12.05□□□□□ -0.48
RD3-201ENST00000367002 HAUS8Q9BT25 410 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
RD3-201ENST00000367002 BATF3Q9NR55 127 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 DONSONQ9NYP3 566 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 PRDM4Q9UKN5 801 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 PREX1Q8TCU6 1659 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 TMEM131LA2VDJ0 1609 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 SNRPAP09012 282 aaKnown RBP12.05□□□□□ -0.48
RD3-201ENST00000367002 KRT4P19013 534 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 BRD2P25440 801 aaKnown RBP12.05□□□□□ -0.48
RD3-201ENST00000367002 RBP5P82980 135 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 KLC1Q07866 573 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 HABP4Q5JVS0 413 aaKnown RBP12.05□□□□□ -0.48
RD3-201ENST00000367002 C3orf20Q8ND61 904 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.05□□□□□ -0.48
RD3-201ENST00000367002 MTBPQ96DY7 904 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 THTPAQ9BU02 230 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 C17orf75Q9HAS0 396 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 NWD1Q149M9 1564 aa12.05□□□□□ -0.48
RD3-201ENST00000367002 RASSF10A6NK89 507 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 SCTRP47872 440 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 PTENP60484 403 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 YWHAHQ04917 246 aaPredicted RBP12.04□□□□□ -0.48
RD3-201ENST00000367002 CUL3Q13618 768 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 TKFCQ3LXA3 575 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 LRRC23Q53EV4 343 aaPredicted RBP12.04□□□□□ -0.48
RD3-201ENST00000367002 WDR59Q6PJI9 974 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 NDUFAF2Q8N183 169 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 LRRC71Q8N4P6 559 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 FAM71DQ8N9W8 422 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 GLIS3Q8NEA6 775 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 ZNF507Q8TCN5 953 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 AENQ8WTP8 325 aaKnown RBP12.04□□□□□ -0.48
RD3-201ENST00000367002 FAM129AQ9BZQ8 928 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 RSAD1Q9HA92 442 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 PCMTD2Q9NV79 361 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 SPATA31A5Q5VU36 1347 aa12.04□□□□□ -0.48
RD3-201ENST00000367002 SPATA31A7Q8IWB4 1347 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms