RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 MRPL4Q9BYD3 311 aaKnown RBP15.15■□□□□ 0.02
VPS29-201ENST00000360579 PTPRHQ9HD43 1115 aa15.15■□□□□ 0.02
VPS29-201ENST00000360579 CNTN3Q9P232 1028 aa15.15■□□□□ 0.02
VPS29-201ENST00000360579 COL4A2P08572 1712 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 GDF9O60383 454 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 MCF2P10911 925 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 MARCKSP29966 332 aaPredicted RBP15.14■□□□□ 0.01
VPS29-201ENST00000360579 MCM4P33991 863 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 OSTNP61366 133 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 TEAD2Q15562 447 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 AASDHQ4L235 1098 aaPredicted RBP15.14■□□□□ 0.01
VPS29-201ENST00000360579 HAUS6Q7Z4H7 955 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 FAM160A2Q8N612 972 aaPredicted RBP15.14■□□□□ 0.01
VPS29-201ENST00000360579 SHKBP1Q8TBC3 707 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 DDX12PQ92771 950 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 LOXL4Q96JB6 756 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 ZMAT2Q96NC0 199 aaKnown RBP15.14■□□□□ 0.01
VPS29-201ENST00000360579 TCHPQ9BT92 498 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 BHMT2Q9H2M3 363 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 TMEM134Q9H6X4 195 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 PCDHB8Q9UN66 801 aa15.14■□□□□ 0.01
VPS29-201ENST00000360579 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.14■□□□□ 0.01
VPS29-201ENST00000360579 MYBPHLA2RUH7 354 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 SLC38A8A6NNN8 435 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 CCDC169A6NNP5 214 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 DTNBO60941 627 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 OR52Z1P0C646 297 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 GJA1P17302 382 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 SRSF5Q13243 272 aaKnown RBP15.13■□□□□ 0.01
VPS29-201ENST00000360579 DMP1Q13316 513 aaPredicted RBP15.13■□□□□ 0.01
VPS29-201ENST00000360579 SAFBQ15424 915 aaKnown RBP eCLIP15.13■□□□□ 0.01
VPS29-201ENST00000360579 ARHGAP29Q52LW3 1261 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 HEATR6Q6AI08 1181 aaKnown RBP15.13■□□□□ 0.01
VPS29-201ENST00000360579 WDR5BQ86VZ2 330 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 C12orf50Q8NA57 414 aaPredicted RBP15.13■□□□□ 0.01
VPS29-201ENST00000360579 BEST2Q8NFU1 509 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 GTF3C6Q969F1 213 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 KIF12Q96FN5 646 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 TBC1D32Q96NH3 1257 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 RBM12Q9NTZ6 932 aaKnown RBP15.13■□□□□ 0.01
VPS29-201ENST00000360579 RBM19Q9Y4C8 960 aaKnown RBP15.13■□□□□ 0.01
VPS29-201ENST00000360579 YIPF1Q9Y548 306 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 STK24Q9Y6E0 443 aa15.13■□□□□ 0.01
VPS29-201ENST00000360579 TICRRQ7Z2Z1 1910 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 A0A1W2PRU2 124 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 SPECC1L-ADORA2AF8WAN1 911 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 DPYSL4O14531 572 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 FGF19O95750 216 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 CTHP32929 405 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 CCT6AP40227 531 aaKnown RBP15.12■□□□□ 0.01
VPS29-201ENST00000360579 EPHB3P54753 998 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 SHC2P98077 582 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 YWHAHQ04917 246 aaPredicted RBP15.12■□□□□ 0.01
VPS29-201ENST00000360579 MPZL3Q6UWV2 235 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 RNF19BQ6ZMZ0 732 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 Q6ZS52 159 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 OBP2AQ9NY56 170 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 ASB3Q9Y575 518 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 NCANO14594 1321 aa15.12■□□□□ 0.01
VPS29-201ENST00000360579 CEP295Q9C0D2 2601 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 CCDC163A0A0D9SF12 145 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 OAZ2O95190 189 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 PROZP22891 400 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 PMLP29590 882 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 ALDH1A3P47895 512 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 NPTX2P47972 431 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 SOX9P48436 509 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 PEX3P56589 373 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 PLCB2Q00722 1185 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 CACNA2D4Q7Z3S7 1137 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 ARID3BQ8IVW6 561 aaPredicted RBP15.11■□□□□ 0.01
VPS29-201ENST00000360579 NECAB1Q8N987 351 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 NSUN7Q8NE18 718 aaKnown RBP15.11■□□□□ 0.01
VPS29-201ENST00000360579 C18orf25Q96B23 403 aaPredicted RBP15.11■□□□□ 0.01
VPS29-201ENST00000360579 RSPRY1Q96DX4 576 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 DRC1Q96MC2 740 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 TARS2Q9BW92 718 aaKnown RBP15.11■□□□□ 0.01
VPS29-201ENST00000360579 C17orf75Q9HAS0 396 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 POLD4Q9HCU8 107 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 KMT5AQ9NQR1 393 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 ARHGAP28Q9P2N2 729 aa15.11■□□□□ 0.01
VPS29-201ENST00000360579 CNOT1A5YKK6 2376 aaKnown RBP15.11■□□□□ 0.01
VPS29-201ENST00000360579 OR6C75A6NL08 312 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 M0QZQ0 153 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 ZNF806P0C7X5 589 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 ANAPC15P60006 121 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 CCINQ13939 588 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 PTPAQ15257 358 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 ARHGAP15Q53QZ3 475 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 TXNDC11Q6PKC3 985 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 USP37Q86T82 979 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 TMC8Q8IU68 726 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 GAB3Q8WWW8 586 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 LRRC3Q9BY71 257 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 KCNG1Q9UIX4 513 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 KIAA1024Q9UPX6 916 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 PCDHGA5Q9Y5G8 931 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 CACNA1GO43497 2377 aa15.1■□□□□ 0.01
VPS29-201ENST00000360579 ABLIM1O14639 778 aa15.09■□□□□ 0.01
VPS29-201ENST00000360579 AXIN1O15169 862 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms