RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 ABHD2P08910 425 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 MAPTP10636 758 aaKnown RBP11.53□□□□□ -0.56
RPE-202ENST00000359429 PECAM1P16284 738 aaPredicted RBP11.53□□□□□ -0.56
RPE-202ENST00000359429 KRT15P19012 456 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 CA4P22748 312 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 VPS72Q15906 364 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 UGCGQ16739 394 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 C11orf91Q3C1V1 193 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 RGS9BPQ6ZS82 235 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 GSTA5Q7RTV2 222 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 ENDOVQ8N8Q3 282 aaKnown RBP11.53□□□□□ -0.56
RPE-202ENST00000359429 SPDYE1Q8NFV5 336 aaPredicted RBP11.53□□□□□ -0.56
RPE-202ENST00000359429 KIFAP3Q92845 792 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 SYT15Q9BQS2 421 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 MXRA8Q9BRK3 442 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 MAK16Q9BXY0 300 aaKnown RBP11.53□□□□□ -0.56
RPE-202ENST00000359429 KCNH7Q9NS40 1196 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 KANSL3Q9P2N6 904 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 DNPEPQ9ULA0 475 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 USTQ9Y2C2 406 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 KLRG2A4D1S0 409 aaPredicted RBP11.53□□□□□ -0.56
RPE-202ENST00000359429 TYROBPO43914 113 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 PROSCO94903 275 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 P4HBP07237 508 aaKnown RBP11.53□□□□□ -0.56
RPE-202ENST00000359429 ATP6V1C1P21283 382 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 CNGA1P29973 690 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 SLC1A1P43005 524 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 CTCFP49711 727 aaPredicted RBP11.53□□□□□ -0.56
RPE-202ENST00000359429 MAPK6Q16659 721 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 CTC1Q2NKJ3 1217 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 KHDC1Q4VXA5 237 aaKnown RBP11.53□□□□□ -0.56
RPE-202ENST00000359429 SLC39A4Q6P5W5 647 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 PASD1Q8IV76 773 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 LRRC8CQ8TDW0 803 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 ZBTB10Q96DT7 871 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 FBXO28Q9NVF7 368 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 COL20A1Q9P218 1284 aa11.53□□□□□ -0.56
RPE-202ENST00000359429 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.53□□□□□ -0.56
RPE-202ENST00000359429 ZNFX1Q9P2E3 1918 aaKnown RBP11.52□□□□□ -0.56
RPE-202ENST00000359429 WDR91A4D1P6 747 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 POLRMTO00411 1230 aaKnown RBP11.52□□□□□ -0.56
RPE-202ENST00000359429 DCTN3O75935 186 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 PCK1P35558 622 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 SOX10P56693 466 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 MCCD1P59942 119 aaPredicted RBP11.52□□□□□ -0.56
RPE-202ENST00000359429 ALCAMQ13740 583 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 KAZNQ674X7 775 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 PLA2G4FQ68DD2 849 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 LMBRD2Q68DH5 695 aaPredicted RBP11.52□□□□□ -0.56
RPE-202ENST00000359429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.52□□□□□ -0.56
RPE-202ENST00000359429 NLRP9Q7RTR0 991 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 MTDHQ86UE4 582 aaKnown RBP11.52□□□□□ -0.56
RPE-202ENST00000359429 CCDC125Q86Z20 511 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 RIBC1Q8N443 379 aaPredicted RBP11.52□□□□□ -0.56
RPE-202ENST00000359429 CFAP57Q96MR6 1250 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 RIT2Q99578 217 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 C11orf70Q9BRQ4 267 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 TDRD3Q9H7E2 651 aaKnown RBP11.52□□□□□ -0.56
RPE-202ENST00000359429 NPHS2Q9NP85 383 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 UBN1Q9NPG3 1134 aa11.52□□□□□ -0.56
RPE-202ENST00000359429 AVENQ9NQS1 362 aaPredicted RBP11.52□□□□□ -0.56
RPE-202ENST00000359429 G3V3G9 751 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 YWHABP31946 246 aaKnown RBP11.52□□□□□ -0.57
RPE-202ENST00000359429 SSR1P43307 286 aaKnown RBP11.52□□□□□ -0.57
RPE-202ENST00000359429 NCKAP1LP55160 1127 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 GAD2Q05329 585 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 OVGP1Q12889 678 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 EFTUD2Q15029 972 aaKnown RBP eCLIP11.52□□□□□ -0.576e-7■■■■■ 47.1
RPE-202ENST00000359429 ZYXQ15942 572 aaKnown RBP11.52□□□□□ -0.57
RPE-202ENST00000359429 CCDC142Q17RM4 750 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 DCAF8Q5TAQ9 597 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 LVRNQ6Q4G3 990 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 DSTYKQ6XUX3 929 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 MON1BQ7L1V2 547 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 TDRPQ86YL5 185 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.52□□□□□ -0.57
RPE-202ENST00000359429 OGFOD1Q8N543 542 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 TEX9Q8N6V9 391 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 BBOF1Q8ND07 529 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 RFWD2Q8NHY2 731 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 ZNF75CPQ92670 426 aaPredicted RBP11.52□□□□□ -0.57
RPE-202ENST00000359429 SMC6Q96SB8 1091 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 DCTN4Q9UJW0 460 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 TBX20Q9UMR3 447 aa11.52□□□□□ -0.57
RPE-202ENST00000359429 TRAFD1O14545 582 aaPredicted RBP11.51□□□□□ -0.57
RPE-202ENST00000359429 DNALI1O14645 258 aaPredicted RBP11.51□□□□□ -0.57
RPE-202ENST00000359429 PLSCR1O15162 318 aa11.51□□□□□ -0.57
RPE-202ENST00000359429 NOP14P78316 857 aaKnown RBP11.51□□□□□ -0.57
RPE-202ENST00000359429 PTP4A2Q12974 167 aa11.51□□□□□ -0.57
RPE-202ENST00000359429 FAM102BQ5T8I3 360 aa11.51□□□□□ -0.57
RPE-202ENST00000359429 CLNKQ7Z7G1 428 aa11.51□□□□□ -0.57
RPE-202ENST00000359429 RHOT1Q8IXI2 618 aa11.51□□□□□ -0.57
RPE-202ENST00000359429 ZBED8Q8IZ13 594 aa11.51□□□□□ -0.57
RPE-202ENST00000359429 ZNF276Q8N554 614 aa11.51□□□□□ -0.57
RPE-202ENST00000359429 TMEM161BQ8NDZ6 487 aa11.51□□□□□ -0.57
RPE-202ENST00000359429 SPIRE2Q8WWL2 714 aa11.51□□□□□ -0.57
RPE-202ENST00000359429 ZNF516Q92618 1163 aa11.51□□□□□ -0.57
RPE-202ENST00000359429 PRR11Q96HE9 360 aaPredicted RBP11.51□□□□□ -0.57
RPE-202ENST00000359429 ANKRD27Q96NW4 1050 aa11.51□□□□□ -0.57
RPE-202ENST00000359429 RANBP17Q9H2T7 1088 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms