RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 NBNO60934 754 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 USP1O94782 785 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 POTEIP0CG38 1075 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 UBE3AQ05086 875 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 RBBP7Q16576 425 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 Q4G0T1 1027 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 POTEGQ6S5H5 508 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 POTEEQ6S8J3 1075 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 CABLES1Q8TDN4 633 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 ATXN7L3BQ96GX2 97 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 MRPS26Q9BYN8 205 aaKnown RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 ZNF556Q9HAH1 456 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 DMAP1Q9NPF5 467 aaPredicted RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 CPSF3Q9UKF6 684 aaKnown RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 USP6P35125 1406 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 RARGP13631 454 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 YY1P25490 414 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 ARMCX2Q7L311 632 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 LENG1Q96BZ8 264 aaPredicted RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 SAC3D1A6NKF1 404 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 GOLGA8TH3BQL2 631 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 PHKG2P15735 406 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 JAK3P52333 1124 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 NSUN2Q08J23 767 aaKnown RBP eCLIP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 EDRF1Q3B7T1 1238 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 TRIM65Q6PJ69 517 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 HDDC2Q7Z4H3 204 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 TAGAPQ8N103 731 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 UNC45AQ9H3U1 944 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 RABGEF1Q9UJ41 708 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 TMA7Q9Y2S6 64 aaKnown RBP9.18□□□□□ -0.94
COL6A6-201ENST00000358511 USP17L3A6NCW0 530 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 USP17L4A6NCW7 530 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 SLC26A4O43511 780 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 C16orf72Q14CZ0 275 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 EFHC1Q5JVL4 640 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 ZFP1Q6P2D0 407 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 USP17L1Q7RTZ2 530 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 GRID1Q9ULK0 1009 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 IVNS1ABPQ9Y6Y0 642 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 COMMD3-BMI1R4GMX3 469 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 ABCB11O95342 1321 aa9.18□□□□□ -0.94
COL6A6-201ENST00000358511 F8VZ95 297 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 INO80B-WBP1J3KQ70 363 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 C21orf59P57076 290 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 ERVK-24P63145 666 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 OTUD4Q01804 1114 aaKnown RBP9.17□□□□□ -0.94
COL6A6-201ENST00000358511 UGP2Q16851 508 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 EPAS1Q99814 870 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 INO80BQ9C086 356 aaPredicted RBP9.17□□□□□ -0.94
COL6A6-201ENST00000358511 MYO3AQ8NEV4 1616 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 H0YC42 278 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 K7ERI5 159 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 CBFA2T3O75081 653 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 CCND2P30279 289 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 CDH6P55285 790 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 ALX1Q15699 326 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 UBE2SQ16763 222 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 CDH24Q86UP0 819 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 WDR60Q8WVS4 1066 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 INPP5DQ92835 1189 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 RMND5BQ96G75 393 aaPredicted RBP9.17□□□□□ -0.94
COL6A6-201ENST00000358511 VPS50Q96JG6 964 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 MAGED4Q96JG8 741 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 ABL1P00519 1130 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 GSNP06396 782 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 FCGR1AP12314 374 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 DDR1Q08345 913 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 CDCA7Q9BWT1 371 aaPredicted RBP9.17□□□□□ -0.94
COL6A6-201ENST00000358511 FRMD8Q9BZ67 464 aaPredicted RBP9.17□□□□□ -0.94
COL6A6-201ENST00000358511 GOLGA8IPA6NC78 632 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 APOA4P06727 396 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 SDC4P31431 198 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 FMO5P49326 533 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 PEX5P50542 639 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 KRT27Q7Z3Y8 459 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 TRIM8Q9BZR9 551 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 RPF1Q9H9Y2 349 aaKnown RBP9.17□□□□□ -0.94
COL6A6-201ENST00000358511 PLA2R1Q13018 1463 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 PLEKHG3A1L390 1219 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 GOLGA8JA6NMD2 632 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 CTTNQ14247 550 aaKnown RBP9.17□□□□□ -0.94
COL6A6-201ENST00000358511 PIGHQ14442 188 aaPredicted RBP9.17□□□□□ -0.94
COL6A6-201ENST00000358511 RWDD4Q6NW29 188 aaKnown RBP9.17□□□□□ -0.94
COL6A6-201ENST00000358511 MAD2L2Q9UI95 211 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 CNTRLQ7Z7A1 2325 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 TRPC5OSA6NMA1 111 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 ZSCAN9O15535 394 aaPredicted RBP9.17□□□□□ -0.94
COL6A6-201ENST00000358511 CLASP2O75122 1294 aaKnown RBP9.17□□□□□ -0.94
COL6A6-201ENST00000358511 TNFRSF8P28908 595 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 TNFAIP1Q13829 316 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 ZNF667Q5HYK9 610 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 LRRN4CLQ8ND94 238 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 TMEM79Q9BSE2 394 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 TRPC7Q9HCX4 862 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 CYP39A1Q9NYL5 469 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 KLK7P49862 253 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 STKLD1Q8NE28 680 aa9.17□□□□□ -0.94
COL6A6-201ENST00000358511 BTBD10Q9BSF8 475 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms