RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 PHF2O75151 1096 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 MCAMP43121 646 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 DSG1Q02413 1049 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 OVGP1Q12889 678 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 CDC16Q13042 620 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 ZRANB3Q5FWF4 1079 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 DCAF4Q8WV16 495 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 OMA1Q96E52 524 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 CELF4Q9BZC1 486 aaKnown RBP11.7□□□□□ -0.54
COL11A1-202ENST00000358392 FAM49BQ9NUQ9 324 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 IMPAD1Q9NX62 359 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 CHORDC1Q9UHD1 332 aaPredicted RBP11.7□□□□□ -0.54
COL11A1-202ENST00000358392 LCMT1Q9UIC8 334 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 PGK2P07205 417 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 PTPN7P35236 360 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 SHROOM1Q2M3G4 852 aaPredicted RBP11.7□□□□□ -0.54
COL11A1-202ENST00000358392 GALNTL6Q49A17 601 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 MROH9Q5TGP6 573 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 TTC39BQ5VTQ0 682 aaPredicted RBP11.7□□□□□ -0.54
COL11A1-202ENST00000358392 PTRHD1Q6GMV3 140 aaKnown RBP11.7□□□□□ -0.54
COL11A1-202ENST00000358392 TBC1D19Q8N5T2 526 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 IPMKQ8NFU5 416 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 SMARCAD1Q9H4L7 1026 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 PDE5AO76074 875 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 APOA4P06727 396 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 WEE2P0C1S8 567 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 NMT1P30419 496 aaKnown RBP11.7□□□□□ -0.54
COL11A1-202ENST00000358392 ADGRF4Q8IZF3 695 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 CALR3Q96L12 384 aaKnown RBP11.7□□□□□ -0.54
COL11A1-202ENST00000358392 MMP19Q99542 508 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 PARVBQ9HBI1 364 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 SLC40A1Q9NP59 571 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 KRT84Q9NSB2 600 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 STRNO43815 780 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 TP53BP2Q13625 1128 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 CCDC33Q8N5R6 958 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 BHMTQ93088 406 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 KCNK16Q96T55 309 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 ECSITQ9BQ95 431 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 TDP2O95551 362 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 AGTP01019 485 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 PSMC6P62333 389 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 CSNK2BP67870 215 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 RCN1Q15293 331 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 MRPL39Q9NYK5 338 aaKnown RBP11.7□□□□□ -0.54
COL11A1-202ENST00000358392 PLXNC1O60486 1568 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 NUP62P37198 522 aaPredicted RBP11.7□□□□□ -0.54
COL11A1-202ENST00000358392 ACOT2P49753 483 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 RAD51Q06609 339 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 TMEM62Q0P6H9 643 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 CMTM5Q96DZ9 223 aa11.7□□□□□ -0.54
COL11A1-202ENST00000358392 FHDC1Q9C0D6 1143 aaPredicted RBP11.7□□□□□ -0.54
COL11A1-202ENST00000358392 FAM47DPA6NHR8 397 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 POLRMTO00411 1230 aaKnown RBP11.69□□□□□ -0.54
COL11A1-202ENST00000358392 TFE3P19532 575 aaPredicted RBP11.69□□□□□ -0.54
COL11A1-202ENST00000358392 SOX6P35712 828 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 WLSQ5T9L3 541 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 TMC5Q6UXY8 1006 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 GPR141Q7Z602 305 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 RCOR2Q8IZ40 523 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 DDHD1Q8NEL9 900 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 SENP7Q9BQF6 1050 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 MANSC1Q9H8J5 431 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 CNGB3Q9NQW8 809 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 ZMYM3Q14202 1370 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 TMEM120BA0PK00 339 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 NDUFB5O43674 189 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 CTCFP49711 727 aaPredicted RBP11.69□□□□□ -0.54
COL11A1-202ENST00000358392 KLK7P49862 253 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 SGF29Q96ES7 293 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 ZFYVE1Q9HBF4 777 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 PSD3Q9NYI0 1048 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 CCND1P24385 295 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 CHI3L1P36222 383 aaPredicted RBP11.69□□□□□ -0.54
COL11A1-202ENST00000358392 TRIM32Q13049 653 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 AP3B2Q13367 1082 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 PGS1Q32NB8 556 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 GIMAP8Q8ND71 665 aaPredicted RBP11.69□□□□□ -0.54
COL11A1-202ENST00000358392 CALML6Q8TD86 181 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 SH3TC2Q8TF17 1288 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 PRR23AA6NEV1 266 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 EEF2KO00418 725 aaKnown RBP11.69□□□□□ -0.54
COL11A1-202ENST00000358392 CRKP46108 304 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 SEC24CP53992 1094 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 POTEAQ6S8J7 498 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 FMR1NBQ8N0W7 255 aaPredicted RBP11.69□□□□□ -0.54
COL11A1-202ENST00000358392 FAM136AQ96C01 138 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 TMEM47Q9BQJ4 181 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 THUMPD3Q9BV44 507 aaKnown RBP11.69□□□□□ -0.54
COL11A1-202ENST00000358392 HDHD2Q9H0R4 259 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 ABCA10Q8WWZ4 1543 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 TRIM13O60858 407 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 SASH1O94885 1247 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 QARSP47897 775 aaKnown RBP11.69□□□□□ -0.54
COL11A1-202ENST00000358392 COG2Q14746 738 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 ZNF614Q8N883 585 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 DPF2Q92785 391 aa11.69□□□□□ -0.54
COL11A1-202ENST00000358392 NMD3Q96D46 503 aaKnown RBP11.69□□□□□ -0.54
COL11A1-202ENST00000358392 KLHL31Q9H511 634 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms