RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 M0QYV0 167 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 STAT3P40763 770 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 GCLMP48507 274 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 C6orf10Q5SRN2 563 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 KIF2BQ8N4N8 673 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 APPL2Q8NEU8 664 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 FOPNLQ96NB1 174 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 ZIM3Q96PE6 472 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 TRAPPC9Q96Q05 1148 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 NDFIP2Q9NV92 336 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 ZC3H7BQ9UGR2 993 aaKnown RBP13.44□□□□□ -0.26
SMC4-202ENST00000357388 NEU2Q9Y3R4 380 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 DNALI1O14645 258 aaPredicted RBP13.43□□□□□ -0.26
SMC4-202ENST00000357388 CYTH3O43739 400 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 ST8SIA6P61647 398 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 GTF2H3Q13889 308 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 ANGPT1Q15389 498 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 MTFR1Q15390 333 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 PFKFB3Q16875 520 aaPredicted RBP13.43□□□□□ -0.26
SMC4-202ENST00000357388 THEMIS2Q5TEJ8 643 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 SPATA17Q96L03 361 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 ZFP42Q96MM3 310 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 MRPL4Q9BYD3 311 aaKnown RBP13.43□□□□□ -0.26
SMC4-202ENST00000357388 FAM192AQ9GZU8 254 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 LSM7Q9UK45 103 aaKnown RBP13.43□□□□□ -0.26
SMC4-202ENST00000357388 HPS5Q9UPZ3 1129 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 PLEKHG2Q9H7P9 1386 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 NPHP4O75161 1426 aaPredicted RBP13.43□□□□□ -0.26
SMC4-202ENST00000357388 PTPRKQ15262 1439 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 EVPLLA8MZ36 301 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 THRAP10827 490 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 ARL4DP49703 201 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 FAM45BPQ6NSW5 357 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 IKBIPQ70UQ0 350 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 OR6P1Q8NGX9 317 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 RAET1EQ8TD07 263 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 C17orf80Q9BSJ5 609 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 CTNNAL1Q9UBT7 734 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 UBA6A0AVT1 1052 aaPredicted RBP13.43□□□□□ -0.26
SMC4-202ENST00000357388 S100A9P06702 114 aaKnown RBP13.43□□□□□ -0.26
SMC4-202ENST00000357388 KRT20P35900 424 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 IL12RB1P42701 662 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 PADI6Q6TGC4 694 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 RIN3Q8TB24 985 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 BTN2A2Q8WVV5 523 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 PALLDQ8WX93 1383 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 HEG1Q9ULI3 1381 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 STILQ15468 1287 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 BTBD8Q5XKL5 378 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 C19orf18Q8NEA5 215 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 VPS37AQ8NEZ2 397 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 GLMNQ92990 594 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 MRPL48Q96GC5 212 aaKnown RBP13.43□□□□□ -0.26
SMC4-202ENST00000357388 ACAD9Q9H845 621 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 AATKQ6ZMQ8 1374 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 PRPF4O43172 522 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMC4-202ENST00000357388 CLASP2O75122 1294 aaKnown RBP13.43□□□□□ -0.26
SMC4-202ENST00000357388 FAM200BP0CF97 657 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 PDAP1Q13442 181 aaKnown RBP13.43□□□□□ -0.26
SMC4-202ENST00000357388 BFSP2Q13515 415 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 DCAF4L1Q3SXM0 396 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 RCSD1Q6JBY9 416 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 RNF135Q8IUD6 432 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 DCUN1D1Q96GG9 259 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 MAGEB18Q96M61 343 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 ALG13Q9NP73 1137 aaKnown RBP13.43□□□□□ -0.26
SMC4-202ENST00000357388 IMPAD1Q9NX62 359 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 RNF181Q9P0P0 153 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 BTBD7Q9P203 1132 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 COPG2Q9UBF2 871 aa13.43□□□□□ -0.26
SMC4-202ENST00000357388 ANKARQ7Z5J8 1434 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 DYTNA2CJ06 578 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 PRKAB2O43741 272 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 HIST1H2AGP0C0S8 130 aaPredicted RBP13.42□□□□□ -0.26
SMC4-202ENST00000357388 HIST1H2ADP20671 130 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 GNL1P36915 607 aaPredicted RBP13.42□□□□□ -0.26
SMC4-202ENST00000357388 MLH1P40692 756 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 CDH6P55285 790 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 WASHC2DQ5SRD0 308 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 E4F1Q66K89 784 aaPredicted RBP13.42□□□□□ -0.26
SMC4-202ENST00000357388 FGD2Q7Z6J4 655 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 ANKMY2Q8IV38 441 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 HIST1H2AHQ96KK5 128 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 QKIQ96PU8 341 aaKnown RBP eCLIP13.42□□□□□ -0.267e-7■■■■■ 232.7
SMC4-202ENST00000357388 HIST1H2AJQ99878 128 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 H2AFJQ9BTM1 129 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 SPON2Q9BUD6 331 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 KRCC1Q9NPI7 259 aaPredicted RBP13.42□□□□□ -0.26
SMC4-202ENST00000357388 ZFYVE16Q7Z3T8 1539 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 A0A1W2PQJ5 194 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 PRR23AA6NEV1 266 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 C3orf70A6NLC5 250 aaPredicted RBP13.42□□□□□ -0.26
SMC4-202ENST00000357388 TEX33O43247 280 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 PDE9AO76083 593 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 KRT6AP02538 564 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 KRT6BP04259 564 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 KRT6CP48668 564 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 ZNF235Q14590 738 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 PAK5Q9P286 719 aa13.42□□□□□ -0.26
SMC4-202ENST00000357388 KDM5AP29375 1690 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms