RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ATXN2LQ8WWM7 1075 aaKnown RBP13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 BBS2Q9BXC9 721 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 TUFT1Q9NNX1 390 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 EXOSC4Q9NPD3 245 aaKnown RBP13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 SAMD9LQ8IVG5 1584 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 ZBTB24O43167 697 aaPredicted RBP13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 FIGNQ5HY92 759 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 IFNEQ86WN2 208 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 COQ7Q99807 217 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 EIF2AK1Q9BQI3 630 aaKnown RBP13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 TIPINQ9BVW5 301 aa13.31□□□□□ -0.28
SYNCRIP-201ENST00000355238 ABCB11O95342 1321 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 F5H423 210 aaPredicted RBP13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 GOLGA8TH3BQL2 631 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 H2AFYO75367 372 aaKnown RBP13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 APOA4P06727 396 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 EIF2AK2P19525 551 aaKnown RBP13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 USP10Q14694 798 aaKnown RBP13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 LPCAT2Q7L5N7 544 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 CCDC60Q8IWA6 550 aaPredicted RBP13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 FUKQ8N0W3 1084 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 MRPS26Q9BYN8 205 aaKnown RBP13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 CASS4Q9NQ75 786 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 BSDC1Q9NW68 430 aaPredicted RBP13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 USP17L15C9J2P7 530 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 USP17L13C9JLJ4 530 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 USP17L11C9JVI0 530 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 USP17L18D6R9N7 530 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 USP17L22D6RA61 530 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 USP17L17D6RBQ6 530 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 USP17L19D6RCP7 530 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 USP17L20D6RJB6 530 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 AHCYL1O43865 530 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 USP17L24Q0WX57 530 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 INAQ16352 499 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 SNX30Q5VWJ9 437 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 USP17L6PQ6QN14 398 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 HPS3Q969F9 1004 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 APPL1Q9UKG1 709 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 KANSL1LA0AUZ9 987 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 GSG1L2A8MUP6 293 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 KCNJ1P48048 391 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 PPIDQ08752 370 aaKnown RBP13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 OVGP1Q12889 678 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 EFCAB1Q9HAE3 211 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 PNPLA7Q6ZV29 1317 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 SOX6P35712 828 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 NPEPPSP55786 919 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 BNC2Q6ZN30 1099 aaPredicted RBP13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 FAM162AQ96A26 154 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 NLRP4Q96MN2 994 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 TRIM54Q9BYV2 358 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 CNOT7Q9UIV1 285 aaKnown RBP13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 FAM32AQ9Y421 112 aaKnown RBP13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 STAT3P40763 770 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 EIF2B2P49770 351 aaKnown RBP13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 KLK7P49862 253 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 C6orf10Q5SRN2 563 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 KLHDC7AQ5VTJ3 777 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 EFL1Q7Z2Z2 1120 aaKnown RBP13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 KLHL11Q9NVR0 708 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 USP6P35125 1406 aa13.3□□□□□ -0.28
SYNCRIP-201ENST00000355238 CRKLP46109 303 aaKnown RBP13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 ADARP55265 1226 aaKnown RBP13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 SZRD1Q7Z422 152 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 TLK2Q86UE8 772 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 VPS50Q96JG6 964 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 FAM111AQ96PZ2 611 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 KCNK10P57789 538 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 SWT1Q5T5J6 900 aaKnown RBP13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 MTDHQ86UE4 582 aaKnown RBP13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 SLC30A5Q8TAD4 765 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 STK32AQ8WU08 396 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 C18orf8Q96DM3 657 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 RBAKQ9NYW8 714 aaPredicted RBP13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 ZBTB1Q9Y2K1 713 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 MYO1GB0I1T2 1018 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 RPS6KA5O75582 802 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 TNFAIP8O95379 198 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 CYP2D6P10635 497 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 CRELD2Q6UXH1 353 aaPredicted RBP13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 DSTYKQ6XUX3 929 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 ZSWIM1Q9BR11 485 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 C2orf40Q9H1Z8 148 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 DCP1AQ9NPI6 582 aaPredicted RBP13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 GGA2Q9UJY4 613 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 DGKIO75912 1065 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 ZNF568Q3ZCX4 644 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 HAUS6Q7Z4H7 955 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 MKNK1Q9BUB5 465 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 ATAD3AQ9NVI7 634 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 DMGDHQ9UI17 866 aaKnown RBP13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 SRRM3A6NNA2 597 aaPredicted RBP13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 P4HA2O15460 535 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 SASH3O75995 380 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 MXD4Q14582 209 aaPredicted RBP13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 HDDC2Q7Z4H3 204 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 RBBP8Q99708 897 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 LXNQ9BS40 222 aa13.29□□□□□ -0.28
SYNCRIP-201ENST00000355238 ILKAPQ9H0C8 392 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms