RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 FOXN3O00409 490 aaPredicted RBP12.84□□□□□ -0.35
SMAD9-201ENST00000350148 PSTPIP1O43586 416 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 STAG3L1P0CL83 205 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 TROVE2P10155 538 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMAD9-201ENST00000350148 EFHC1Q5JVL4 640 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 SYNJ2BP-COX16A0A087WUM0 186 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 ABL1P00519 1130 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 RANBP1P43487 201 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 CCDC60Q8IWA6 550 aaPredicted RBP12.84□□□□□ -0.35
SMAD9-201ENST00000350148 CLEC4DQ8WXI8 215 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 EXOC4Q96A65 974 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 SNF8Q96H20 258 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 TMEM117Q9H0C3 514 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 COX16Q9P0S2 106 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 SATB2Q9UPW6 733 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 AP3B1O00203 1094 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 FAM110CQ1W6H9 321 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 SV2AQ7L0J3 742 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 CCNYQ8ND76 341 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 SMC1BQ8NDV3 1235 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 NFU1Q9UMS0 254 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 DDX60Q8IY21 1712 aaKnown RBP12.84□□□□□ -0.35
SMAD9-201ENST00000350148 IGLV3-22A0A075B6J6 115 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 LGALS2P05162 132 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 KRT10P13645 584 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 CYP11B1P15538 503 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 CCT5P48643 541 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 LRRC31Q6UY01 552 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 EFCAB13Q8IY85 973 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 NLGN2Q8NFZ4 835 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 PARD3BQ8TEW8 1205 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 USP6NLQ92738 828 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 N4BP2L2Q92802 583 aaPredicted RBP12.84□□□□□ -0.35
SMAD9-201ENST00000350148 SH3GL3Q99963 347 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 PPCSQ9HAB8 311 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 HDAC6Q9UBN7 1215 aa12.84□□□□□ -0.35
SMAD9-201ENST00000350148 GNGT1P63211 74 aa12.83□□□□□ -0.35
SMAD9-201ENST00000350148 MRPS9P82933 396 aaKnown RBP12.83□□□□□ -0.35
SMAD9-201ENST00000350148 MAP2K5Q13163 448 aa12.83□□□□□ -0.35
SMAD9-201ENST00000350148 PHLDB2Q86SQ0 1253 aa12.83□□□□□ -0.35
SMAD9-201ENST00000350148 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.35
SMAD9-201ENST00000350148 KCTD10Q9H3F6 313 aa12.83□□□□□ -0.35
SMAD9-201ENST00000350148 BAIAP2L1Q9UHR4 511 aa12.83□□□□□ -0.35
SMAD9-201ENST00000350148 DSEQ9UL01 958 aa12.83□□□□□ -0.35
SMAD9-201ENST00000350148 RASGRF2O14827 1237 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 MSH2P43246 934 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 DYNLT1P63172 113 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 IL9RQ01113 521 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 MFSD10Q14728 455 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 C11orf63Q6NUN7 778 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 RGMBQ6NW40 437 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 CCDC137Q6PK04 289 aaKnown RBP12.83□□□□□ -0.36
SMAD9-201ENST00000350148 MMS22LQ6ZRQ5 1243 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 PPP1R2P1Q96PQ5 205 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 NRCAMQ92823 1304 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 A0A087X0T9 212 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 FAM228BP0C875 321 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 PLA2G4AP47712 749 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 PSEN2P49810 448 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 ABHD15Q6UXT9 468 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 C4orf50Q6ZRC1 276 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 ARHGAP20Q9P2F6 1191 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 MID2Q9UJV3 735 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 IRS2Q9Y4H2 1338 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 HNRNPH3P31942 346 aaKnown RBP12.83□□□□□ -0.36
SMAD9-201ENST00000350148 KPNA2P52292 529 aaKnown RBP12.83□□□□□ -0.36
SMAD9-201ENST00000350148 BASP1P80723 227 aaKnown RBP12.83□□□□□ -0.36
SMAD9-201ENST00000350148 BFSP2Q13515 415 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 TMEM161BQ8NDZ6 487 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 STMN2Q93045 179 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 ASTN1O14525 1302 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 CASQ2O14958 399 aaPredicted RBP12.83□□□□□ -0.36
SMAD9-201ENST00000350148 RALAP11233 206 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 ADORA2BP29275 332 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 SERPINB6P35237 376 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 ITPRIPL1Q6GPH6 555 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 GPAT2Q6NUI2 795 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 IL31RAQ8NI17 732 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 CABS1Q96KC9 395 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 TNFSF13BQ9Y275 285 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 ALG6Q9Y672 507 aa12.83□□□□□ -0.36
SMAD9-201ENST00000350148 WNT7AO00755 349 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 MSCO60682 206 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 ITGB3P05106 788 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 ZNF131P52739 623 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 C1QBPQ07021 282 aaKnown RBP12.82□□□□□ -0.36
SMAD9-201ENST00000350148 ASPHQ12797 758 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 ITGB3BPQ13352 177 aaPredicted RBP12.82□□□□□ -0.36
SMAD9-201ENST00000350148 CDO1Q16878 200 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 SLC27A1Q6PCB7 646 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 TLK2Q86UE8 772 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 UPF1Q92900 1129 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMAD9-201ENST00000350148 ZC4H2Q9NQZ6 224 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 SUFUQ9UMX1 484 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 BCAR1P56945 870 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 KLHL38Q2WGJ6 581 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 CCDC110Q8TBZ0 833 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 VCX3BQ9H321 246 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 MAD1L1Q9Y6D9 718 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms