RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 TMEM175Q9BSA9 504 aa13.71□□□□□ -0.22
ERGIC3-202ENST00000348547 GANQ9H2C0 597 aa13.71□□□□□ -0.22
ERGIC3-202ENST00000348547 SMYD3Q9H7B4 428 aa13.71□□□□□ -0.22
ERGIC3-202ENST00000348547 RNF216Q9NWF9 866 aaPredicted RBP13.71□□□□□ -0.22
ERGIC3-202ENST00000348547 RAB20Q9NX57 234 aa13.71□□□□□ -0.22
ERGIC3-202ENST00000348547 GCNT4Q9P109 453 aa13.71□□□□□ -0.22
ERGIC3-202ENST00000348547 MTUS1Q9ULD2 1270 aa13.71□□□□□ -0.22
ERGIC3-202ENST00000348547 PCDHGC5Q9Y5F6 944 aa13.71□□□□□ -0.22
ERGIC3-202ENST00000348547 PLXNA3P51805 1871 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 BRWD1Q9NSI6 2320 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 PTPRDP23468 1912 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 GTPBP10A4D1E9 387 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 B3GAT3O94766 335 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 STAU1O95793 577 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 KRT19P08727 400 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 CDK11BP21127 795 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 RAP1GAPP47736 663 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 AP3M2P53677 418 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 RBP5P82980 135 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 LRMPQ12912 555 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 DCLRE1AQ6PJP8 1040 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 OSTM1Q86WC4 334 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 KLHL23Q8NBE8 558 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 CACTINQ8WUQ7 758 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 KBTBD7Q8WVZ9 684 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 RSPH1Q8WYR4 309 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 ZNF558Q96NG5 402 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 RTP3Q9BQQ7 232 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 VRTNQ9H8Y1 702 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 CERS4Q9HA82 394 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 HMGXB4Q9UGU5 601 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 L1RE1Q9UN81 338 aa13.7□□□□□ -0.22
ERGIC3-202ENST00000348547 PRRC2BQ5JSZ5 2229 aaKnown RBP13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 STX10O60499 249 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 LAG3P18627 525 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 BMPR1AP36894 532 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 CDH8P55286 799 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 ERVK-21P61565 698 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 NOP14P78316 857 aaKnown RBP13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 SMAD3P84022 425 aaKnown RBP13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 SOWAHAQ2M3V2 549 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 LRIT3Q3SXY7 679 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 RTP2Q5QGT7 225 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 RSPO2Q6UXX9 243 aaPredicted RBP13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 SCARA5Q6ZMJ2 495 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 EHBP1Q8NDI1 1231 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 SUSD3Q96L08 255 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 UROC1Q96N76 676 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 ERGIC2Q96RQ1 377 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 NAA15Q9BXJ9 866 aaKnown RBP13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 BCO2Q9BYV7 579 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 TTYH1Q9H313 450 aaPredicted RBP13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 GDAP2Q9NXN4 497 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 ADAM28Q9UKQ2 775 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 FAN1Q9Y2M0 1017 aa13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 TIMM13Q9Y5L4 95 aaPredicted RBP13.69□□□□□ -0.22
ERGIC3-202ENST00000348547 SPTBN5Q9NRC6 3674 aaKnown RBP13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 KPNA7A9QM74 516 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 C5orf67F2Z3F1 127 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 M0QZQ0 153 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 RFXAPO00287 272 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 GRM6O15303 877 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 P4HA2O15460 535 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 LPXNO60711 386 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 PHACTR2O75167 634 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 FGF18O76093 207 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 SERPINC1P01008 464 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 CALCAP01258 141 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 PNMA6AP0CW24 399 aaPredicted RBP13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 ACO1P21399 889 aaKnown RBP13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 TKTP29401 623 aaKnown RBP13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 CTNNB1P35222 781 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 UBXN1Q04323 297 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 ZNF699Q32M78 642 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 KIAA0319Q5VV43 1072 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 PDCL2Q8N4E4 241 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 AUTS2Q8WXX7 1259 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 DDX27Q96GQ7 796 aaKnown RBP13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 LRCH3Q96II8 777 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 SENP8Q96LD8 212 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 TWNKQ96RR1 684 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 LPIN3Q9BQK8 851 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 MRPL45Q9BRJ2 306 aaKnown RBP13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 ANP32EQ9BTT0 268 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 LSM14BQ9BX40 385 aaKnown RBP13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 TTYH3Q9C0H2 523 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 GPR88Q9GZN0 384 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 ALG13Q9NP73 1137 aaKnown RBP13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 SPG21Q9NZD8 308 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 FHOD1Q9Y613 1164 aa13.68□□□□□ -0.22
ERGIC3-202ENST00000348547 A0A1W2PPC1 479 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 PES1O00541 588 aaKnown RBP13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 ADAM12O43184 909 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 XPOTO43592 962 aaKnown RBP13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 N4BP1O75113 896 aaKnown RBP13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 ALDH2P05091 517 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 WEE2P0C1S8 567 aa13.67□□□□□ -0.22
ERGIC3-202ENST00000348547 FGFR3P22607 806 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms