RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 C1orf54Q8WWF1 131 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 TATDN2Q93075 761 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 MXRA8Q9BRK3 442 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 MRPL4Q9BYD3 311 aaKnown RBP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 PABPC3Q9H361 631 aaKnown RBP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 RIOX1Q9H6W3 641 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 UBE4BO95155 1302 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 PHKA2P46019 1235 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 CPA2P48052 419 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 PPIDQ08752 370 aaKnown RBP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 TFDP2Q14188 446 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 STAT4Q14765 748 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 KCNV1Q6PIU1 500 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 NSL1Q96IY1 281 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 POLR3CQ9BUI4 534 aaPredicted RBP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 TEX13BQ9BXU2 312 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 ROPN1BQ9BZX4 212 aaPredicted RBP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 UPF3AQ9H1J1 476 aaKnown RBP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 ROPN1Q9HAT0 212 aaPredicted RBP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 PNMA3Q9UL41 463 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 PYGLP06737 847 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 GPC3P51654 580 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 XKR3Q5GH77 459 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 FIGNQ5HY92 759 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 HP1BP3Q5SSJ5 553 aaPredicted RBP16.28■□□□□ 0.2
SRPK1-201ENST00000346162 RSPH3Q86UC2 560 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 KLHL25Q9H0H3 589 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 C2orf40Q9H1Z8 148 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 E2F6O75461 281 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 SNRNP35Q16560 246 aaKnown RBP16.28■□□□□ 0.2
SRPK1-201ENST00000346162 CATSPER1Q8NEC5 780 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 SCG3Q8WXD2 468 aaKnown RBP16.28■□□□□ 0.2
SRPK1-201ENST00000346162 TMEM39BQ9GZU3 492 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 SEMA6BQ9H3T3 888 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.28■□□□□ 0.2
SRPK1-201ENST00000346162 RNF103-CHMP3A0A140T963 221 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 MED24O75448 989 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 GJA8P48165 433 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 PMS1P54277 932 aaKnown RBP16.28■□□□□ 0.2
SRPK1-201ENST00000346162 ARL4CP56559 192 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 KCNMA1Q12791 1236 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 COL23A1Q86Y22 540 aaPredicted RBP16.28■□□□□ 0.2
SRPK1-201ENST00000346162 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.28■□□□□ 0.2
SRPK1-201ENST00000346162 DACT3Q96B18 629 aaPredicted RBP16.28■□□□□ 0.2
SRPK1-201ENST00000346162 GIMAP4Q9NUV9 329 aa16.28■□□□□ 0.2
SRPK1-201ENST00000346162 H3BRJ5 948 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 FOXP2O15409 715 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 KRT37O76014 449 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 EIF2B2P49770 351 aaKnown RBP16.27■□□□□ 0.2
SRPK1-201ENST00000346162 DUOXA2Q1HG44 320 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 ADAM33Q9BZ11 813 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 PARVBQ9HBI1 364 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 ABCF3Q9NUQ8 709 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 SMG5Q9UPR3 1016 aaKnown RBP16.27■□□□□ 0.2
SRPK1-201ENST00000346162 DCTN2Q13561 401 aaKnown RBP16.27■□□□□ 0.2
SRPK1-201ENST00000346162 SIX6OS1Q8N1H7 587 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 SPATA17Q96L03 361 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 AGBL1Q96MI9 1066 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 FBXO28Q9NVF7 368 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 PCSK1NQ9UHG2 260 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 A0A087X0T9 212 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 LIN7AO14910 233 aaPredicted RBP16.27■□□□□ 0.2
SRPK1-201ENST00000346162 VIL1P09327 827 aaKnown RBP16.27■□□□□ 0.2
SRPK1-201ENST00000346162 FAM228BP0C875 321 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 PPM1FP49593 454 aaPredicted RBP16.27■□□□□ 0.2
SRPK1-201ENST00000346162 PEX5P50542 639 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 TNFAIP2Q03169 654 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 C16orf72Q14CZ0 275 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 ARMCX2Q7L311 632 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 SLC30A5Q8TAD4 765 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 FAM193BQ96PV7 902 aaPredicted RBP16.27■□□□□ 0.2
SRPK1-201ENST00000346162 ERP44Q9BS26 406 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 RANBP17Q9H2T7 1088 aaKnown RBP16.27■□□□□ 0.2
SRPK1-201ENST00000346162 GOLPH3Q9H4A6 298 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 KCNH7Q9NS40 1196 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 IP6K2Q9UHH9 426 aa16.27■□□□□ 0.2
SRPK1-201ENST00000346162 A0A087X0B3 334 aa16.27■□□□□ 0.19
SRPK1-201ENST00000346162 KRT3P12035 628 aa16.27■□□□□ 0.19
SRPK1-201ENST00000346162 WWP1Q9H0M0 922 aa16.27■□□□□ 0.19
SRPK1-201ENST00000346162 HNRNPRO43390 633 aaKnown RBP16.26■□□□□ 0.19
SRPK1-201ENST00000346162 STAT5BP51692 787 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 TBX2Q13207 712 aaPredicted RBP16.26■□□□□ 0.19
SRPK1-201ENST00000346162 XRCC4Q13426 336 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 PRPSAP1Q14558 356 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 KLHL38Q2WGJ6 581 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 FSCBQ5H9T9 825 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 WASHC2DQ5SRD0 308 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 PLA2G4FQ68DD2 849 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 C4orf33Q8N1A6 199 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 ZDHHC15Q96MV8 337 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 ECE1P42892 770 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 ACOT2P49753 483 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 STYK1Q6J9G0 422 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 MOXD1Q6UVY6 613 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 ACER1Q8TDN7 264 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 UVRAGQ9P2Y5 699 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 ATXN2Q99700 1313 aaKnown RBP16.26■□□□□ 0.19
SRPK1-201ENST00000346162 WTIPA6NIX2 430 aaPredicted RBP16.26■□□□□ 0.19
SRPK1-201ENST00000346162 PRAMEP78395 509 aa16.26■□□□□ 0.19
SRPK1-201ENST00000346162 BLMHQ13867 455 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms