RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 RASGRF2O14827 1237 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 TP73O15350 636 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 ITGA8P53708 1063 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 IRX3P78415 501 aaPredicted RBP15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 RHOT1Q8IXI2 618 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 TRAPPC12Q8WVT3 735 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 ZNF606Q8WXB4 792 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 BBXQ8WY36 941 aaPredicted RBP15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 SEPT1Q8WYJ6 367 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 ELP3Q9H9T3 547 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 AAASQ9NRG9 546 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 CD2APQ9Y5K6 639 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 BRCA2P51587 3418 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 MEFVO15553 781 aaPredicted RBP15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 ATF2P15336 505 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 TFAMQ00059 246 aaKnown RBP15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 NEDD9Q14511 834 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 TMEM132AQ24JP5 1023 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 HSDL1Q3SXM5 330 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 TTC31Q49AM3 519 aaPredicted RBP15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 WDR78Q5VTH9 848 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 TRIM72Q6ZMU5 477 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 MICALCLQ6ZW33 695 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 RIOX2Q8IUF8 465 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 BRSK2Q8IWQ3 736 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 ACSF2Q96CM8 615 aaPredicted RBP15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 SNF8Q96H20 258 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 TMEM134Q9H6X4 195 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 MRPL47Q9HD33 250 aaKnown RBP15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 DDX20Q9UHI6 824 aaKnown RBP15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 CSADQ9Y600 493 aa15.82■□□□□ 0.12
VIPAS39-202ENST00000343765 MAFO75444 373 aaPredicted RBP15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 GAS8O95995 478 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 WEE2P0C1S8 567 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 CDR1P51861 262 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 ADCY2Q08462 1091 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 LAMTOR4Q0VGL1 99 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 PTP4A2Q12974 167 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 THNSL1Q8IYQ7 743 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 PGM2Q96G03 612 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 NLRP4Q96MN2 994 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 SCLT1Q96NL6 688 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 MRPL4Q9BYD3 311 aaKnown RBP15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 OSBPL8Q9BZF1 889 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 CNOT10Q9H9A5 744 aaKnown RBP15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 NOP56O00567 594 aaKnown RBP15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 IRF6O14896 467 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 PRKCBP05771 671 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 KRT10P13645 584 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 C6orf118Q5T5N4 469 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 METTL7BQ6UX53 244 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 CPLX4Q7Z7G2 160 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 RHPN2Q8IUC4 686 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 TMEM130Q8N3G9 435 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 WHRNQ9P202 907 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 PPP2R3BQ9Y5P8 575 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 FOXO6A8MYZ6 492 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 MSCO60682 206 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 TOM1L1O75674 476 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 ATF7P17544 494 aaPredicted RBP15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 PLEKHA7Q6IQ23 1121 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 GSTA5Q7RTV2 222 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 PHF13Q86YI8 300 aaPredicted RBP15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 MAIP1Q8WWC4 291 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 MCEEQ96PE7 176 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 XPO6Q96QU8 1125 aaKnown RBP15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 ADAM7Q9H2U9 754 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 SCINQ9Y6U3 715 aa15.81■□□□□ 0.12
VIPAS39-202ENST00000343765 PSTPIP1O43586 416 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 EDNRBP24530 442 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 IFNAR2P48551 515 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 PTK6Q13882 451 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 TMEM63BQ5T3F8 832 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 MOB2Q70IA6 237 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 ZNF365Q70YC5 407 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 CEP120Q8N960 986 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 ATL2Q8NHH9 583 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 FEZF2Q8TBJ5 459 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 GRK7Q8WTQ7 553 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 SLCO2A1Q92959 643 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 CLMNQ96JQ2 1002 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 CISHQ9NSE2 258 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 PARVAQ9NVD7 372 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 CTNNAL1Q9UBT7 734 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 ANAPC5Q9UJX4 755 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 DDNO94850 711 aaPredicted RBP15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 ASS1P00966 412 aaKnown RBP15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 PAEPP09466 180 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 IVDP26440 423 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 KLF1Q13351 362 aaPredicted RBP15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 TRPC3Q13507 836 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 AUHQ13825 339 aaKnown RBP15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 KYNUQ16719 465 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 CYP4A22Q5TCH4 519 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 FBXO16Q8IX29 292 aaPredicted RBP15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 GPC2Q8N158 579 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 COPS5Q92905 334 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 HAUS1Q96CS2 278 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 PPP1R16BQ96T49 567 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 ACO2Q99798 780 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms