RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 LRRC63Q05C16 580 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 STIM1Q13586 685 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 MORC3Q14149 939 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 SMAD2Q15796 467 aaKnown RBP14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 SV2CQ496J9 727 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 VARS2Q5ST30 1063 aaKnown RBP14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PTCRAQ6ISU1 281 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 SYCE2Q6PIF2 218 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PRSS55Q6UWB4 352 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 EP400NLQ6ZTU2 488 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 USP37Q86T82 979 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 RDH13Q8NBN7 331 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TMC2Q8TDI7 906 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PARD3BQ8TEW8 1205 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 MKNK1Q9BUB5 465 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PRKAG3Q9UGI9 489 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 MAN1B1Q9UKM7 699 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 DSEQ9UL01 958 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 BRWD1Q9NSI6 2320 aa14.12□□□□□ -0.15
HLA-DQA1-201ENST00000343139 GOLGA6L22H0YM25 854 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 I3L4J1 428 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PPEF2O14830 753 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 IKBKBO14920 756 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 SPTLC1O15269 473 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 MBTPS2O43462 519 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TGM5O43548 720 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ITGB3P05106 788 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ODC1P11926 461 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 EPCAMP16422 314 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 NR2F2P24468 414 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 RBM10P98175 930 aaKnown RBP14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 YWHAHQ04917 246 aaPredicted RBP14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ZNF280DQ6N043 979 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 LLGL2Q6P1M3 1020 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 C15orf39Q6ZRI6 1047 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ZC3H3Q8IXZ2 948 aaKnown RBP14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 SPATA18Q8TC71 538 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 NOC3LQ8WTT2 800 aaKnown RBP14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 SUSD6Q92537 303 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 BORCS6Q96GS4 357 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 DHTKD1Q96HY7 919 aaPredicted RBP14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 SENP8Q96LD8 212 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 MTMR12Q9C0I1 747 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 GZF1Q9H116 711 aaPredicted RBP14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ADAM7Q9H2U9 754 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 SFXN1Q9H9B4 322 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 GDAP2Q9NXN4 497 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 KIAA1468Q9P260 1216 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 MAPK8IP1Q9UQF2 711 aa14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PDCD11Q14690 1871 aaKnown RBP14.11□□□□□ -0.15
HLA-DQA1-201ENST00000343139 KPNA7A9QM74 516 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PSMA7O14818 248 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TNNI1P19237 187 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 KCNQ1P51787 676 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ADAM9Q13443 819 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 UVSSAQ2YD98 709 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 DSTYKQ6XUX3 929 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 INTS8Q75QN2 995 aaKnown RBP14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TRAPPC11Q7Z392 1133 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 SMYD4Q8IYR2 804 aaPredicted RBP14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CSGALNACT2Q8N6G5 542 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 OR5B17Q8NGF7 314 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ERCC4Q92889 916 aaPredicted RBP14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 NECTIN4Q96NY8 510 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ZDHHC7Q9NXF8 308 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 SIX4Q9UIU6 781 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 FBXW11Q9UKB1 542 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 AGAP1Q9UPQ3 857 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PTPRJQ12913 1337 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 A0A0C4DFX4 3053 aa14.1□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TRIP11Q15643 1979 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 OR6C75A6NL08 312 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 AKAP3O75969 853 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ABLIM3O94929 683 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 STAU1O95793 577 aaKnown RBP14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 POU2F2P09086 479 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 DLATP10515 647 aaKnown RBP14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 RPL17P18621 184 aaKnown RBP14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 BMP6P22004 513 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 POLR2BP30876 1174 aaKnown RBP14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 HOXA9P31269 272 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 OR1D2P34982 312 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 PSMC2P35998 433 aaKnown RBP14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 MYO1EQ12965 1108 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TPGS2Q68CL5 300 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CES5AQ6NT32 575 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 DPH6Q7L8W6 267 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ZNF461Q8TAF7 563 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 TSG101Q99816 390 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CLSTN2Q9H4D0 955 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 MAN1C1Q9NR34 630 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 FBXL5Q9UKA1 691 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 R3HCC1Q9Y3T6 440 aaKnown RBP14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CDY1Q9Y6F8 540 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 VCANP13611 3396 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CETN3O15182 167 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 FAM163BP0C2L3 166 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CCNE1P24864 410 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 ATICP31939 592 aa14.09□□□□□ -0.15
HLA-DQA1-201ENST00000343139 CASP4P49662 377 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms