RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 LONP2Q86WA8 852 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 MCPH1Q8NEM0 835 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 UBASH3BQ8TF42 649 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 FAR2Q96K12 515 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 PCIF1Q9H4Z3 704 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 CEP72Q9P209 647 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 SMAD5Q99717 465 aaKnown RBP18.41■□□□□ 0.54
SMAD4-201ENST00000342988 ALKBH5Q6P6C2 394 aaKnown RBP18.41■□□□□ 0.54
SMAD4-201ENST00000342988 DSN1Q9H410 356 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 BTBD3Q9Y2F9 522 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 CTSWP56202 376 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 PRPF39Q86UA1 669 aaKnown RBP18.4■□□□□ 0.54
SMAD4-201ENST00000342988 RHOT1Q8IXI2 618 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 C1orf131Q8NDD1 294 aaKnown RBP18.4■□□□□ 0.54
SMAD4-201ENST00000342988 CCDC177Q9NQR7 707 aaPredicted RBP18.4■□□□□ 0.54
SMAD4-201ENST00000342988 ZNF624Q9P2J8 865 aaPredicted RBP18.4■□□□□ 0.54
SMAD4-201ENST00000342988 POLG2Q9UHN1 485 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 AP3D1O14617 1153 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 CNPP09543 421 aaKnown RBP18.4■□□□□ 0.54
SMAD4-201ENST00000342988 HOXB7P09629 217 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 ACTN3Q08043 901 aaPredicted RBP18.4■□□□□ 0.54
SMAD4-201ENST00000342988 MIGA2Q7L4E1 593 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 SPAG6O75602 509 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 GPC3P51654 580 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 ME3Q16798 604 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 CENPLQ8N0S6 344 aaPredicted RBP18.4■□□□□ 0.54
SMAD4-201ENST00000342988 CCDC126Q96EE4 140 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 ABCB6Q9NP58 842 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 CNOT8Q9UFF9 292 aaKnown RBP18.4■□□□□ 0.54
SMAD4-201ENST00000342988 ACTR2P61160 394 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 PTK6Q13882 451 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 MAPK6Q16659 721 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 EIF2S3LQ2VIR3 472 aaKnown RBP18.4■□□□□ 0.54
SMAD4-201ENST00000342988 DGKKQ5KSL6 1271 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 TTC39BQ5VTQ0 682 aaPredicted RBP18.4■□□□□ 0.54
SMAD4-201ENST00000342988 PGBD3Q8N328 593 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 IFNGR2P38484 337 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 TPI1P60174 286 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 RALGDSQ12967 914 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 ATPAF2Q8N5M1 289 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 DDX17Q92841 729 aaKnown RBP18.4■□□□□ 0.54
SMAD4-201ENST00000342988 RACGAP1Q9H0H5 632 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 CD209Q9NNX6 404 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 TRPC4Q9UBN4 977 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 ABCA5Q8WWZ7 1642 aa18.4■□□□□ 0.54
SMAD4-201ENST00000342988 PEX5P50542 639 aa18.39■□□□□ 0.54
SMAD4-201ENST00000342988 CCDC137Q6PK04 289 aaKnown RBP18.39■□□□□ 0.54
SMAD4-201ENST00000342988 ZNF786Q8N393 782 aa18.39■□□□□ 0.54
SMAD4-201ENST00000342988 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.39■□□□□ 0.54
SMAD4-201ENST00000342988 PPP2R3BQ9Y5P8 575 aa18.39■□□□□ 0.54
SMAD4-201ENST00000342988 TTC7AQ9ULT0 858 aaPredicted RBP18.39■□□□□ 0.54
SMAD4-201ENST00000342988 PCDHA7Q9UN72 937 aa18.39■□□□□ 0.54
SMAD4-201ENST00000342988 RHAGQ02094 409 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 ZCWPW2Q504Y3 356 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 UQCRBP14927 111 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 GPR162Q16538 588 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 PTRHD1Q6GMV3 140 aaKnown RBP18.39■□□□□ 0.53
SMAD4-201ENST00000342988 HS6ST3Q8IZP7 471 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 RIBC1Q8N443 379 aaPredicted RBP18.39■□□□□ 0.53
SMAD4-201ENST00000342988 CYFIP2Q96F07 1278 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 EMILIN3Q9NT22 766 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 XPO7Q9UIA9 1087 aaKnown RBP18.39■□□□□ 0.53
SMAD4-201ENST00000342988 SIK3Q9Y2K2 1263 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 VHLP40337 213 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 CCDC144BQ3MJ40 725 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 POMGNT2Q8NAT1 580 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 ATXN7L3BQ96GX2 97 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 ZBTB40Q9NUA8 1239 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 MYH1P12882 1939 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 MYH2Q9UKX2 1941 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 MYH4Q9Y623 1939 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 FAM220BPB1ANY3 271 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 ECE2O60344 883 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 TRIP10Q15642 601 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 SVOPQ8N4V2 548 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 ZMYM3Q14202 1370 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 LRRC14BA6NHZ5 514 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 GNA15P30679 374 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 MZT2BQ6NZ67 158 aa18.39■□□□□ 0.53
SMAD4-201ENST00000342988 EIF3LQ9Y262 564 aaKnown RBP18.39■□□□□ 0.53
SMAD4-201ENST00000342988 USP15Q9Y4E8 981 aaPredicted RBP18.39■□□□□ 0.53
SMAD4-201ENST00000342988 CASP4P49662 377 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 ZNF564Q8TBZ8 553 aaPredicted RBP18.38■□□□□ 0.53
SMAD4-201ENST00000342988 C2orf40Q9H1Z8 148 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 TRAPPC3O43617 180 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 NDST4Q9H3R1 872 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 ZHX2Q9Y6X8 837 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 PABPC1P11940 636 aaKnown RBP18.38■□□□□ 0.53
SMAD4-201ENST00000342988 POU4F1Q01851 419 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 LPIN1Q14693 890 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 EZH2Q15910 746 aaKnown RBP18.38■□□□□ 0.53
SMAD4-201ENST00000342988 TTLL9Q3SXZ7 439 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 CATSPER4Q7RTX7 472 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 PLA2G4BP0C869 781 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 ARSEP51690 589 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 ZNF57Q68EA5 555 aaPredicted RBP18.38■□□□□ 0.53
SMAD4-201ENST00000342988 TRPV3Q8NET8 790 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 CLMNQ96JQ2 1002 aa18.38■□□□□ 0.53
SMAD4-201ENST00000342988 SARSP49591 514 aaKnown RBP18.38■□□□□ 0.53
SMAD4-201ENST00000342988 HNRNPH2P55795 449 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms