RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PECAM1P16284 738 aaPredicted RBP15.25■□□□□ 0.03
CPSF7-201ENST00000340437 TAC1P20366 129 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 GPC3P51654 580 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 OSTNP61366 133 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 EN1Q05925 392 aaPredicted RBP15.25■□□□□ 0.03
CPSF7-201ENST00000340437 CYP4A22Q5TCH4 519 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 MFSD7Q6UXD7 560 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 PAXIP1Q6ZW49 1069 aaPredicted RBP15.25■□□□□ 0.03
CPSF7-201ENST00000340437 VTI1AQ96AJ9 217 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 MIEF2Q96C03 454 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 NPHS2Q9NP85 383 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 AGTPBP1Q9UPW5 1226 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 F8VP50 259 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 ICAM1P05362 532 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 GAD2Q05329 585 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 CGB2Q6NT52 195 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 MAIP1Q8WWC4 291 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 MCEEQ96PE7 176 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 POLR3FQ9H1D9 316 aaPredicted RBP15.24■□□□□ 0.03
CPSF7-201ENST00000340437 ATP6V0A4Q9HBG4 840 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 C15orf41Q9Y2V0 281 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 PCDHB2Q9Y5E7 798 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 AHDC1Q5TGY3 1603 aaPredicted RBP15.24■□□□□ 0.03
CPSF7-201ENST00000340437 ATP8B3O60423 1300 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 PROSCO94903 275 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 BNIP1Q12981 228 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 MYBPC2Q14324 1141 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 EFTUD2Q15029 972 aaKnown RBP eCLIP15.24■□□□□ 0.032e-7■■■■■ 31.2
CPSF7-201ENST00000340437 PGM5Q15124 567 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 TXNRD3NBQ6F5E7 133 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 RPAINQ86UA6 219 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 LRRC37BQ96QE4 947 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 TMEM109Q9BVC6 243 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 RXFP1Q9HBX9 757 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 TBC1D22BQ9NU19 505 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 FDX1P10109 184 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 ORC1Q13415 861 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 SLC27A3Q5K4L6 730 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 IVNS1ABPQ9Y6Y0 642 aa15.24■□□□□ 0.03
CPSF7-201ENST00000340437 PDHA1P08559 390 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 NFX1Q12986 1120 aaKnown RBP15.23■□□□□ 0.03
CPSF7-201ENST00000340437 TAF11Q15544 211 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 RHBDF2Q6PJF5 856 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 PPP1R21Q6ZMI0 780 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 KCTD17Q8N5Z5 321 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 FAM151AQ8WW52 585 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 WNK4Q96J92 1243 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 MAGEB18Q96M61 343 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 TARS2Q9BW92 718 aaKnown RBP15.23■□□□□ 0.03
CPSF7-201ENST00000340437 A0A0G2JND7 137 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 SSTR1P30872 391 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 NRLP54845 237 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 BBS9Q3SYG4 887 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 B3GNT9Q6UX72 402 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 MCF2L2Q86YR7 1114 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 MAP4K3Q8IVH8 894 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 RBBP8NLQ8NC74 664 aaPredicted RBP15.23■□□□□ 0.03
CPSF7-201ENST00000340437 CLEC4DQ8WXI8 215 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 MYPNQ86TC9 1320 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 ZNF862O60290 1169 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 MTA2O94776 668 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 CD19P15391 556 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 YY1P25490 414 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 POLGP54098 1239 aaPredicted RBP15.23■□□□□ 0.03
CPSF7-201ENST00000340437 MAMLD1Q13495 774 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 TDRD10Q5VZ19 366 aaKnown RBP15.23■□□□□ 0.03
CPSF7-201ENST00000340437 CDR2LQ86X02 465 aaPredicted RBP15.23■□□□□ 0.03
CPSF7-201ENST00000340437 SPDL1Q96EA4 605 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 CFAP57Q96MR6 1250 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 KIAA1586Q9HCI6 787 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 UBN1Q9NPG3 1134 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 PCSK1NQ9UHG2 260 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 AGO2Q9UKV8 859 aaKnown RBP15.23■□□□□ 0.03
CPSF7-201ENST00000340437 RIPK3Q9Y572 518 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 PCDHA10Q9Y5I2 948 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 ZNF536O15090 1300 aa15.23■□□□□ 0.03
CPSF7-201ENST00000340437 UNGP13051 313 aaPredicted RBP15.22■□□□□ 0.03
CPSF7-201ENST00000340437 BRD2P25440 801 aaKnown RBP15.22■□□□□ 0.03
CPSF7-201ENST00000340437 NCKAP1LP55160 1127 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 SLC1A5Q15758 541 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 LVRNQ6Q4G3 990 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 EEPD1Q7L9B9 569 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 C12orf50Q8NA57 414 aaPredicted RBP15.22■□□□□ 0.03
CPSF7-201ENST00000340437 PIK3R2O00459 728 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 KRT4P19013 534 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 EPHB2P29323 1055 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 PCK1P35558 622 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 ZBTB16Q05516 673 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 SPARCL1Q14515 664 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 STAT4Q14765 748 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 LONP2Q86WA8 852 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 KIAA1683Q9H0B3 1180 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 RBAKQ9NYW8 714 aaPredicted RBP15.22■□□□□ 0.03
CPSF7-201ENST00000340437 UBIAD1Q9Y5Z9 338 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 PTPRJQ12913 1337 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 WEE2P0C1S8 567 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 ATP2A2P16615 1042 aaKnown RBP15.22■□□□□ 0.03
CPSF7-201ENST00000340437 MUTP22033 750 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 MAN1A1P33908 653 aa15.22■□□□□ 0.03
CPSF7-201ENST00000340437 MTMR2Q13614 643 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms