RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 MYO1EQ12965 1108 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 C10orf76Q5T2E6 689 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 TXLNBQ8N3L3 684 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 RBBP8NLQ8NC74 664 aaPredicted RBP15.73■□□□□ 0.11
CBX3-201ENST00000337620 OLIG1Q8TAK6 271 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 DIS3LQ8TF46 1054 aaKnown RBP15.73■□□□□ 0.11
CBX3-201ENST00000337620 TSPAN18Q96SJ8 248 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 GAD1Q99259 594 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 PACSIN1Q9BY11 444 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 TSGA10Q9BZW7 698 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 DNAI1Q9UI46 699 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 A0A0U1RQF3 1178 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 PPEF2O14830 753 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 MMEP08473 750 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 P4HA1P13674 534 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 CHRNB2P17787 502 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 RAP1GAPP47736 663 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 CDH8P55286 799 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 ZNF394Q53GI3 561 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 ZNF569Q5MCW4 686 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 ZNF662Q6ZS27 426 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 MRPL10Q7Z7H8 261 aaKnown RBP15.73■□□□□ 0.11
CBX3-201ENST00000337620 PALB2Q86YC2 1186 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 RPS6KC1Q96S38 1066 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 TRAIPQ9BWF2 469 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 VRTNQ9H8Y1 702 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 GOLGA2P5Q9HBQ8 144 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 PAXBP1Q9Y5B6 917 aa15.73■□□□□ 0.11
CBX3-201ENST00000337620 MACROD2A1Z1Q3 448 aa15.72■□□□□ 0.11
CBX3-201ENST00000337620 PTGESO14684 152 aa15.72■□□□□ 0.11
CBX3-201ENST00000337620 ZNF623O75123 536 aa15.72■□□□□ 0.11
CBX3-201ENST00000337620 TUBB4AP04350 444 aa15.72■□□□□ 0.11
CBX3-201ENST00000337620 TNNC1P63316 161 aa15.72■□□□□ 0.11
CBX3-201ENST00000337620 CDR2Q01850 454 aa15.72■□□□□ 0.11
CBX3-201ENST00000337620 C9orf57Q5W0N0 161 aa15.72■□□□□ 0.11
CBX3-201ENST00000337620 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.72■□□□□ 0.11
CBX3-201ENST00000337620 AGMOQ6ZNB7 445 aa15.72■□□□□ 0.11
CBX3-201ENST00000337620 UBR7Q8N806 425 aa15.72■□□□□ 0.11
CBX3-201ENST00000337620 MMS19Q96T76 1030 aa15.72■□□□□ 0.11
CBX3-201ENST00000337620 SMYD3Q9H7B4 428 aa15.72■□□□□ 0.11
CBX3-201ENST00000337620 PUF60Q9UHX1 559 aaKnown RBP15.72■□□□□ 0.11
CBX3-201ENST00000337620 CNTN6Q9UQ52 1028 aa15.72■□□□□ 0.11
CBX3-201ENST00000337620 GIT1Q9Y2X7 761 aa15.72■□□□□ 0.11
CBX3-201ENST00000337620 ARL5CA6NH57 179 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 DCDC2CA8MYV0 355 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 PJA2O43164 708 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 GNA15P30679 374 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 GJA8P48165 433 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 AFF1P51825 1210 aaKnown RBP15.71■□□□□ 0.11
CBX3-201ENST00000337620 YWHAEP62258 255 aaKnown RBP15.71■□□□□ 0.11
CBX3-201ENST00000337620 FMO1Q01740 532 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 SOX4Q06945 474 aaPredicted RBP15.71■□□□□ 0.11
CBX3-201ENST00000337620 KIF18AQ8NI77 898 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 DDX1Q92499 740 aaKnown RBP15.71■□□□□ 0.11
CBX3-201ENST00000337620 WDR24Q96S15 920 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 BCO2Q9BYV7 579 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 TAS2R14Q9NYV8 317 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 NENFQ9UMX5 172 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 STAU1O95793 577 aaKnown RBP15.71■□□□□ 0.11
CBX3-201ENST00000337620 SKIP12755 728 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 TLE2Q04725 743 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 TRIM60Q495X7 471 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 ANKRD33Q7Z3H0 272 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 RTN4RL1Q86UN2 441 aaPredicted RBP15.71■□□□□ 0.11
CBX3-201ENST00000337620 PGBD4Q96DM1 585 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 FAXDC2Q96IV6 333 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 PPP1R10Q96QC0 940 aaKnown RBP15.71■□□□□ 0.11
CBX3-201ENST00000337620 PCDHB18PQ96TA0 734 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 SDCBP2Q9H190 292 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 PDCL3Q9H2J4 239 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 RGS18Q9NS28 235 aa15.71■□□□□ 0.11
CBX3-201ENST00000337620 PITPNM1O00562 1244 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 NBNO60934 754 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 THP07101 528 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 H2AFZP0C0S5 128 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 ATF7P17544 494 aaPredicted RBP15.7■□□□□ 0.1
CBX3-201ENST00000337620 CYP3A5P20815 502 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 NAP1L1P55209 391 aaKnown RBP15.7■□□□□ 0.1
CBX3-201ENST00000337620 FAAP100Q0VG06 881 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 H2AFVQ71UI9 128 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 ECHDC2Q86YB7 292 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 LRRC52Q8N7C0 313 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 GSTCDQ8NEC7 633 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 SECISBP2LQ93073 1101 aaKnown RBP15.7■□□□□ 0.1
CBX3-201ENST00000337620 HIPK3Q9H422 1215 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 RSAD1Q9HA92 442 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 MIOSQ9NXC5 875 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 SNX9Q9Y5X1 595 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 PDCD11Q14690 1871 aaKnown RBP15.7■□□□□ 0.1
CBX3-201ENST00000337620 ANO9A1A5B4 782 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 PIRO00625 290 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 THAP12O43422 761 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 CASQ1P31415 396 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 SCNN1GP51170 649 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 ZNF132P52740 706 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 ZNF677Q86XU0 584 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 SLC35F6Q8N357 371 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 PPP1R12CQ9BZL4 782 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 CYP3A43Q9HB55 503 aa15.7■□□□□ 0.1
CBX3-201ENST00000337620 SLC38A7Q9NVC3 462 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms