RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 ZNF558Q96NG5 402 aa14.74□□□□□ -0.05
TUBA1B-202ENST00000336023 NT5C1BQ96P26 610 aa14.74□□□□□ -0.05
TUBA1B-202ENST00000336023 SIX2Q9NPC8 291 aa14.74□□□□□ -0.05
TUBA1B-202ENST00000336023 FAM207AQ9NSI2 230 aaPredicted RBP14.74□□□□□ -0.05
TUBA1B-202ENST00000336023 NXF1Q9UBU9 619 aaKnown RBP14.74□□□□□ -0.05
TUBA1B-202ENST00000336023 PCDHA11Q9Y5I1 949 aa14.74□□□□□ -0.05
TUBA1B-202ENST00000336023 PTPRSQ13332 1948 aa14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 FNDC1Q4ZHG4 1894 aaPredicted RBP14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 KPNA7A9QM74 516 aa14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 TMEM189-UBE2V1I3L0A0 370 aa14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 TADA2AO75478 443 aa14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 LINC00271P0C7V0 271 aa14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 KLHDC7AQ5VTJ3 777 aa14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 TMEM173Q86WV6 379 aaPredicted RBP14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 VSTM4Q8IW00 320 aa14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 COLGALT1Q8NBJ5 622 aa14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 PLCB1Q9NQ66 1216 aa14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 AAASQ9NRG9 546 aa14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 MARCH5Q9NX47 278 aa14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 APEX2Q9UBZ4 518 aa14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 SNX9Q9Y5X1 595 aa14.73□□□□□ -0.05
TUBA1B-202ENST00000336023 PDCD11Q14690 1871 aaKnown RBP14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 LINC01553A4QN01 128 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 CARNS1A5YM72 827 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 NOL4O94818 638 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 CA3P07451 260 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 PAX3P23760 479 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 PBX2P40425 430 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 BRCC3P46736 316 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 AARSP49588 968 aaKnown RBP eCLIP14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 TIGD5Q53EQ6 642 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 GJB7Q6PEY0 223 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 RRAGAQ7L523 313 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 ARHGEF19Q8IW93 802 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 PPM1KQ8N3J5 372 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 NEK11Q8NG66 645 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 SENP8Q96LD8 212 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 PBX4Q9BYU1 374 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 NIF3L1Q9GZT8 377 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 UBE2TQ9NPD8 197 aaPredicted RBP14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 GDAP2Q9NXN4 497 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 ADAM28Q9UKQ2 775 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 POLIQ9UNA4 740 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 YBX2Q9Y2T7 364 aaKnown RBP14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 PCDHB12Q9Y5F1 795 aa14.72□□□□□ -0.05
TUBA1B-202ENST00000336023 CHD9Q3L8U1 2897 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 I3L4J1 428 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 EPHB6O15197 1021 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 ARHGEF15O94989 841 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 P4HA1P13674 534 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 UCHL3P15374 230 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 TRIM21P19474 475 aaKnown RBP14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 TNNC1P63316 161 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 SPECC1LQ69YQ0 1117 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 DSTYKQ6XUX3 929 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 SCARA5Q6ZMJ2 495 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 SLC39A11Q8N1S5 342 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 BCL7CQ8WUZ0 217 aaPredicted RBP14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 IGSF21Q96ID5 467 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 MMS19Q96T76 1030 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 GANQ9H2C0 597 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 SPG21Q9NZD8 308 aa14.71□□□□□ -0.05
TUBA1B-202ENST00000336023 ITIH6Q6UXX5 1313 aa14.71□□□□□ -0.06
TUBA1B-202ENST00000336023 TDRD15B5MCY1 1934 aaKnown RBP14.71□□□□□ -0.06
TUBA1B-202ENST00000336023 CYB561D2O14569 222 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 TRAPPC3O43617 180 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 BMPR1AP36894 532 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 ASPAP45381 313 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 GCNT1Q02742 428 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 CUL2Q13617 745 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 RAB30Q15771 203 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 KAT5Q92993 513 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 FAXDC2Q96IV6 333 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 SUSD3Q96L08 255 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 ARID3AQ99856 593 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 MSRAQ9UJ68 235 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 DNAJC12Q9UKB3 198 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 FHOD1Q9Y613 1164 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 SCN1AP35498 2009 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 M0QZQ0 153 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 HUS1O60921 280 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 WEE2P0C1S8 567 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 TBXAS1P24557 533 aaPredicted RBP14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 PPM1AP35813 382 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 POLR2FP61218 127 aaKnown RBP14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 SOWAHAQ2M3V2 549 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 IQCEQ6IPM2 695 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 FUT10Q6P4F1 479 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 TMC6Q7Z403 805 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 APPL2Q8NEU8 664 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 TMEM169Q96HH4 297 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 KREMEN1Q96MU8 473 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 NUP58Q9BVL2 599 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 NAA15Q9BXJ9 866 aaKnown RBP14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 BCO2Q9BYV7 579 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 GPR62Q9BZJ7 368 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 SMYD3Q9H7B4 428 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 AJAP1Q9UKB5 411 aaPredicted RBP14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 L1RE1Q9UN81 338 aa14.7□□□□□ -0.06
TUBA1B-202ENST00000336023 RWDD3Q9Y3V2 267 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms