RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 EMSYQ7Z589 1322 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 PLEKHG3A1L390 1219 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 NUP62P37198 522 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-201ENST00000334504 FXR1P51114 621 aaKnown RBP eCLIP10.26□□□□□ -0.77
COL4A6-201ENST00000334504 TAP1Q03518 808 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 EEPD1Q7L9B9 569 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 ARID3BQ8IVW6 561 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-201ENST00000334504 TC2NQ8N9U0 490 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 USP38Q8NB14 1042 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 SCFD1Q8WVM8 642 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 MAGEB18Q96M61 343 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 TRAPPC9Q96Q05 1148 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 RGL1Q9NZL6 768 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 KLHL18O94889 574 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 SNRPAP09012 282 aaKnown RBP10.26□□□□□ -0.77
COL4A6-201ENST00000334504 PFKFB3Q16875 520 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-201ENST00000334504 AGAP3Q96P47 875 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 TAF4O00268 1085 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 SNPHO15079 494 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 GALCP54803 685 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 KCTD2Q14681 263 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 SGSM1Q2NKQ1 1148 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 EPS8L3Q8TE67 593 aaKnown RBP10.26□□□□□ -0.77
COL4A6-201ENST00000334504 CDHR1Q96JP9 859 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 TMBIM4Q9HC24 238 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 PCDHA6Q9UN73 950 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 PCDHA8Q9Y5H6 950 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 SUPT3HB4E1H0 165 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 PPIDQ08752 370 aaKnown RBP10.26□□□□□ -0.77
COL4A6-201ENST00000334504 NR1I3Q14994 352 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 THEMIS2Q5TEJ8 643 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 TBC1D10CQ8IV04 446 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 SLC30A5Q8TAD4 765 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 PLEKHF1Q96S99 279 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 AP5M1Q9H0R1 490 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 FANCEQ9HB96 536 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 RAB6BQ9NRW1 208 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 APPL1Q9UKG1 709 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 F8VZ95 297 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 TRIM13O60858 407 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 ADORA2BP29275 332 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 C21orf59P57076 290 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 CSTF3Q12996 717 aaKnown RBP10.25□□□□□ -0.77
COL4A6-201ENST00000334504 DCAF15Q66K64 600 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 CALML6Q8TD86 181 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 ZNF483Q8TF39 744 aaPredicted RBP10.25□□□□□ -0.77
COL4A6-201ENST00000334504 KANSL2Q9H9L4 492 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 TMEM260Q9NX78 707 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 ARHGEF38Q9NXL2 777 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 UTYO14607 1347 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 BCL10O95999 233 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 SRGNP10124 158 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 ARHGEF26Q96DR7 871 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 SERPINB12Q96P63 405 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 ERP44Q9BS26 406 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 CACNA2D2Q9NY47 1150 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 NFKBIL1Q9UBC1 381 aaPredicted RBP10.25□□□□□ -0.77
COL4A6-201ENST00000334504 GRID1Q9ULK0 1009 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 STAP1Q9ULZ2 295 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 H3BQF6 201 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 FAM58BPP0C7Q3 252 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 EIF2AK2P19525 551 aaKnown RBP10.25□□□□□ -0.77
COL4A6-201ENST00000334504 TFE3P19532 575 aaPredicted RBP10.25□□□□□ -0.77
COL4A6-201ENST00000334504 GEMIN4P57678 1058 aaKnown RBP10.25□□□□□ -0.77
COL4A6-201ENST00000334504 ARMC4Q5T2S8 1044 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 NYAP1Q6ZVC0 841 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 FRMD5Q7Z6J6 570 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 REXO1L1PQ8IX06 675 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 GUF1Q8N442 669 aaKnown RBP10.25□□□□□ -0.77
COL4A6-201ENST00000334504 TMEM79Q9BSE2 394 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 DCUN1D5Q9BTE7 237 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 PEG3Q9GZU2 1588 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 IMPAD1Q9NX62 359 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 SELENONQ9NZV5 590 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 KDM5AP29375 1690 aaKnown RBP10.25□□□□□ -0.77
COL4A6-201ENST00000334504 ZNF197O14709 1029 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 UBOX5O94941 541 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 ANKS3Q6ZW76 656 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 CCDC80Q76M96 950 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 CAPSLQ8WWF8 208 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 TMEM117Q9H0C3 514 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 ITGB1BP2Q9UKP3 347 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 KCNMA1Q12791 1236 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 CPA5Q8WXQ8 436 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 TSPAN17Q96FV3 270 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 SLC7A5P2Q9GIP4 190 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 ATAD3AQ9NVI7 634 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 MAP10Q9P2G4 905 aa10.25□□□□□ -0.77
COL4A6-201ENST00000334504 DENND3A2RUS2 1198 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 POTEFA5A3E0 1075 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 CFAP99D6REC4 459 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 POTEIP0CG38 1075 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 NDUFA5Q16718 116 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 POTEGQ6S5H5 508 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 POTEEQ6S8J3 1075 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 PTPRN2Q92932 1015 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 MCRS1Q96EZ8 462 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 MAML3Q96JK9 1138 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 KLHL20Q9Y2M5 609 aa10.24□□□□□ -0.77
COL4A6-201ENST00000334504 RPAP1Q9BWH6 1393 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms