RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 MMS22LQ6ZRQ5 1243 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 CCDC121Q6ZUS5 278 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 PIGWQ7Z7B1 504 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 NIPA2Q8N8Q9 360 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCDC172-201ENST00000333254 FEZF2Q8TBJ5 459 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 TCP11Q8WWU5 503 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 OSBPL8Q9BZF1 889 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 PHACTR1Q9C0D0 580 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 NSRP1Q9H0G5 558 aaKnown RBP11.42□□□□□ -0.58
CCDC172-201ENST00000333254 CCDC113Q9H0I3 377 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 KDM4CQ9H3R0 1056 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 RABEP2Q9H5N1 569 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 CHST7Q9NS84 486 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 ASIC3Q9UHC3 531 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 CHORDC1Q9UHD1 332 aaPredicted RBP11.42□□□□□ -0.58
CCDC172-201ENST00000333254 PCDHGC3Q9UN70 934 aa11.42□□□□□ -0.58
CCDC172-201ENST00000333254 LOC102724159A0A0B4J2E5 919 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 TCRBV5S1A1TA0A578 114 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 LRRIQ4A6NIV6 560 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 TOM1L1O75674 476 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 UBA1P22314 1058 aaKnown RBP11.41□□□□□ -0.58
CCDC172-201ENST00000333254 FGFR4P22455 802 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 ACOT2P49753 483 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 GSCP56915 257 aaPredicted RBP11.41□□□□□ -0.58
CCDC172-201ENST00000333254 NCOA4Q13772 614 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 CAPSQ13938 189 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 PWP2Q15269 919 aaKnown RBP11.41□□□□□ -0.58
CCDC172-201ENST00000333254 KCNV1Q6PIU1 500 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 TMEM270Q6UE05 265 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 RCOR2Q8IZ40 523 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 ZNF526Q8TF50 670 aaPredicted RBP11.41□□□□□ -0.58
CCDC172-201ENST00000333254 C1orf54Q8WWF1 131 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 CPA5Q8WXQ8 436 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 CABS1Q96KC9 395 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 PCYT2Q99447 389 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 TARS2Q9BW92 718 aaKnown RBP11.41□□□□□ -0.58
CCDC172-201ENST00000333254 MRPL4Q9BYD3 311 aaKnown RBP11.41□□□□□ -0.58
CCDC172-201ENST00000333254 C2orf40Q9H1Z8 148 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 PPCSQ9HAB8 311 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 LRRC4CQ9HCJ2 640 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 INTS9Q9NV88 658 aaKnown RBP11.41□□□□□ -0.58
CCDC172-201ENST00000333254 SCAF8Q9UPN6 1271 aaKnown RBP11.41□□□□□ -0.58
CCDC172-201ENST00000333254 EFR3BQ9Y2G0 817 aa11.41□□□□□ -0.58
CCDC172-201ENST00000333254 IGKV6-21A0A0C4DH24 114 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 TMEM191CA6NGB0 347 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 ANKRD65E5RJM6 399 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 TLR3O15455 904 aaKnown RBP11.4□□□□□ -0.58
CCDC172-201ENST00000333254 MSCO60682 206 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 LGR5O75473 907 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 GSTA1P08263 222 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 TMEM191BP0C7N4 346 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 RALAP11233 206 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 KLRC2P26717 231 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 YWHAEP62258 255 aaKnown RBP11.4□□□□□ -0.58
CCDC172-201ENST00000333254 IFT88Q13099 833 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 MXD4Q14582 209 aaPredicted RBP11.4□□□□□ -0.58
CCDC172-201ENST00000333254 STAT4Q14765 748 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 QPCTQ16769 361 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 ANGEL2Q5VTE6 544 aaKnown RBP11.4□□□□□ -0.58
CCDC172-201ENST00000333254 METTL7BQ6UX53 244 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 TRMT1LQ7Z2T5 733 aaKnown RBP11.4□□□□□ -0.58
CCDC172-201ENST00000333254 CPLX4Q7Z7G2 160 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 ANKRD35Q8N283 1001 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 CCDC197Q8NCU1 140 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 EPS8L3Q8TE67 593 aaKnown RBP11.4□□□□□ -0.58
CCDC172-201ENST00000333254 ZNF606Q8WXB4 792 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 TMEM143Q96AN5 459 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 JPH2Q9BR39 696 aaPredicted RBP11.4□□□□□ -0.58
CCDC172-201ENST00000333254 C11orf70Q9BRQ4 267 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 HERPUD2Q9BSE4 406 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 FRMD8P1Q9BZ68 369 aaPredicted RBP11.4□□□□□ -0.58
CCDC172-201ENST00000333254 NIF3L1Q9GZT8 377 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 FAM124BQ9H5Z6 455 aaPredicted RBP11.4□□□□□ -0.58
CCDC172-201ENST00000333254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC172-201ENST00000333254 DDX56Q9NY93 547 aaKnown RBP11.4□□□□□ -0.58
CCDC172-201ENST00000333254 RGS17Q9UGC6 210 aaPredicted RBP11.4□□□□□ -0.58
CCDC172-201ENST00000333254 DRG1Q9Y295 367 aaKnown RBP11.4□□□□□ -0.58
CCDC172-201ENST00000333254 PTPN22Q9Y2R2 807 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 TELO2Q9Y4R8 837 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 NUB1Q9Y5A7 615 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 CD2APQ9Y5K6 639 aa11.4□□□□□ -0.58
CCDC172-201ENST00000333254 GOLGA6L7A0A1B0GV03 622 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 ABLIM1O14639 778 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 IRF6O14896 467 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 OGTO15294 1046 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 EIF4BP23588 611 aaKnown RBP11.4□□□□□ -0.59
CCDC172-201ENST00000333254 ITGA8P53708 1063 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 TAS2R40P59535 323 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 PIGHQ14442 188 aaPredicted RBP11.4□□□□□ -0.59
CCDC172-201ENST00000333254 RASA2Q15283 850 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 CNGA2Q16280 664 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 SKIDA1Q1XH10 827 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 SGSM1Q2NKQ1 1148 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 PPP1R15BQ5SWA1 713 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 ZNF365Q70YC5 407 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 POLNQ7Z5Q5 900 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 EXOC3L1Q86VI1 746 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 ANKS4BQ8N8V4 417 aa11.4□□□□□ -0.59
CCDC172-201ENST00000333254 TMEM35BQ8NCS4 154 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms