RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 PRKAG3Q9UGI9 489 aa15.14■□□□□ 0.01
LIMS1-201ENST00000332345 ITGA11Q9UKX5 1188 aa15.14■□□□□ 0.01
LIMS1-201ENST00000332345 MAPK8IP1Q9UQF2 711 aa15.14■□□□□ 0.01
LIMS1-201ENST00000332345 TRAF3IP3Q9Y228 551 aa15.14■□□□□ 0.01
LIMS1-201ENST00000332345 FRMD4BQ9Y2L6 1034 aa15.14■□□□□ 0.01
LIMS1-201ENST00000332345 NR3C1P04150 777 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 SPATA31D3P0C874 917 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 IL9P15248 144 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 TNNI1P19237 187 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 RPL13P26373 211 aaKnown RBP15.13■□□□□ 0.01
LIMS1-201ENST00000332345 SCN1AP35498 2009 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 WNT7BP56706 349 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 RBP5P82980 135 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 YWHAHQ04917 246 aaPredicted RBP15.13■□□□□ 0.01
LIMS1-201ENST00000332345 CYP24A1Q07973 514 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 RAB33AQ14088 237 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 PSMD6Q15008 389 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 SV2CQ496J9 727 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 ATAT1Q5SQI0 421 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 SPATA31D4Q6ZUB0 917 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 WDR49Q8IV35 697 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 TMEM130Q8N3G9 435 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 KREMEN2Q8NCW0 462 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 SENP8Q96LD8 212 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 RIPOR3Q96MK2 946 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 ZNF560Q96MR9 790 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 UHRF1Q96T88 793 aaPredicted RBP15.13■□□□□ 0.01
LIMS1-201ENST00000332345 APOL5Q9BWW9 433 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 COL25A1Q9BXS0 654 aaPredicted RBP15.13■□□□□ 0.01
LIMS1-201ENST00000332345 SFXN1Q9H9B4 322 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 MAN1C1Q9NR34 630 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 DSEQ9UL01 958 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 AGAP1Q9UPQ3 857 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 USP15Q9Y4E8 981 aaPredicted RBP15.13■□□□□ 0.01
LIMS1-201ENST00000332345 CDY1Q9Y6F8 540 aa15.13■□□□□ 0.01
LIMS1-201ENST00000332345 KPNA7A9QM74 516 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 DLL1O00548 723 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 PPEF2O14830 753 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 OAZ2O95190 189 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 ITGB3P05106 788 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 KRT19P08727 400 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 DLATP10515 647 aaKnown RBP15.12■□□□□ 0.01
LIMS1-201ENST00000332345 ODC1P11926 461 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 TYMPP19971 482 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 MTHFRP42898 656 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 NFIL3Q16649 462 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 CTXN3Q4LDR2 81 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 COBLL1Q53SF7 1204 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 RARS2Q5T160 578 aaKnown RBP15.12■□□□□ 0.01
LIMS1-201ENST00000332345 SLC8B1Q6J4K2 584 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 ZNF280DQ6N043 979 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 CYP26C1Q6V0L0 522 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 METTL23Q86XA0 190 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 C12orf76Q8N812 135 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-201ENST00000332345 C1orf127Q8N9H9 656 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 SUSD6Q92537 303 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 ERCC4Q92889 916 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-201ENST00000332345 CCDC127Q96BQ5 260 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 NECTIN4Q96NY8 510 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 GBP4Q96PP9 640 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 MTMR12Q9C0I1 747 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 PLXNA3P51805 1871 aa15.12■□□□□ 0.01
LIMS1-201ENST00000332345 NCOR1O75376 2440 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 CCDC195A0A1B0GUA6 201 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 CYB561D2O14569 222 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 SPTLC1O15269 473 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 ADAM12O43184 909 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 TBC1D4O60343 1298 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 POLR2BP30876 1174 aaKnown RBP15.11■□□□□ 0.01
LIMS1-201ENST00000332345 PPP1R2P41236 205 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 PRCPP42785 496 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 MYO1EQ12965 1108 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 ADAM9Q13443 819 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 STIM1Q13586 685 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 CBX2Q14781 532 aaPredicted RBP15.11■□□□□ 0.01
LIMS1-201ENST00000332345 UVSSAQ2YD98 709 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 CEP135Q66GS9 1140 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 TMC5Q6UXY8 1006 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 C15orf39Q6ZRI6 1047 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 RTL10Q7L3V2 364 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 ADHFE1Q8IWW8 467 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 SMYD4Q8IYR2 804 aaPredicted RBP15.11■□□□□ 0.01
LIMS1-201ENST00000332345 LRRC52Q8N7C0 313 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 CMASQ8NFW8 434 aaPredicted RBP15.11■□□□□ 0.01
LIMS1-201ENST00000332345 ZNF461Q8TAF7 563 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 POP1Q99575 1024 aaKnown RBP15.11■□□□□ 0.01
LIMS1-201ENST00000332345 CGRRF1Q99675 332 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 FBXL5Q9UKA1 691 aa15.11■□□□□ 0.01
LIMS1-201ENST00000332345 TIMM13Q9Y5L4 95 aaPredicted RBP15.11■□□□□ 0.01
LIMS1-201ENST00000332345 OR6C75A6NL08 312 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 MAPK13O15264 365 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 NR2F2P24468 414 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 ELF1P32519 619 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 AP3M2P53677 418 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 ARPP19P56211 112 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 LIN9Q5TKA1 542 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 TPGS2Q68CL5 300 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 LMBRD2Q68DH5 695 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-201ENST00000332345 OVOS1Q6IE37 1185 aa15.1■□□□□ 0.01
LIMS1-201ENST00000332345 RSPO2Q6UXX9 243 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms