RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CTTNBP2NLQ9P2B4 639 aa19.06■□□□□ 0.64
RAB39A-201ENST00000320578 COG5Q9UP83 839 aa19.06■□□□□ 0.64
RAB39A-201ENST00000320578 PDE2AO00408 941 aaPredicted RBP19.05■□□□□ 0.64
RAB39A-201ENST00000320578 CABYRO75952 493 aa19.05■□□□□ 0.64
RAB39A-201ENST00000320578 LSM8O95777 96 aaKnown RBP19.05■□□□□ 0.64
RAB39A-201ENST00000320578 ITGB3P05106 788 aa19.05■□□□□ 0.64
RAB39A-201ENST00000320578 PAEPP09466 180 aa19.05■□□□□ 0.64
RAB39A-201ENST00000320578 XKR4Q5GH76 650 aa19.05■□□□□ 0.64
RAB39A-201ENST00000320578 SERINC5Q86VE9 423 aa19.05■□□□□ 0.64
RAB39A-201ENST00000320578 PHF13Q86YI8 300 aaPredicted RBP19.05■□□□□ 0.64
RAB39A-201ENST00000320578 MCOLN2Q8IZK6 566 aa19.05■□□□□ 0.64
RAB39A-201ENST00000320578 MMGT1Q8N4V1 131 aa19.05■□□□□ 0.64
RAB39A-201ENST00000320578 ZNF606Q8WXB4 792 aa19.05■□□□□ 0.64
RAB39A-201ENST00000320578 CAPZA3Q96KX2 299 aa19.05■□□□□ 0.64
RAB39A-201ENST00000320578 ZNF518BQ9C0D4 1074 aa19.05■□□□□ 0.64
RAB39A-201ENST00000320578 TRPV2Q9Y5S1 764 aa19.05■□□□□ 0.64
RAB39A-201ENST00000320578 M0QZ92 97 aa19.04■□□□□ 0.64
RAB39A-201ENST00000320578 KRT19P08727 400 aa19.04■□□□□ 0.64
RAB39A-201ENST00000320578 CCND3P30281 292 aaPredicted RBP19.04■□□□□ 0.64
RAB39A-201ENST00000320578 ARHGEF6Q15052 776 aa19.04■□□□□ 0.64
RAB39A-201ENST00000320578 CCDC181Q5TID7 509 aa19.04■□□□□ 0.64
RAB39A-201ENST00000320578 SELENOOQ9BVL4 669 aa19.04■□□□□ 0.64
RAB39A-201ENST00000320578 EIF2AQ9BY44 585 aaKnown RBP19.04■□□□□ 0.64
RAB39A-201ENST00000320578 ARGLU1Q9NWB6 273 aaPredicted RBP19.04■□□□□ 0.64
RAB39A-201ENST00000320578 SNTG2Q9NY99 539 aa19.04■□□□□ 0.64
RAB39A-201ENST00000320578 PCDHGC3Q9UN70 934 aa19.04■□□□□ 0.64
RAB39A-201ENST00000320578 ZSCAN20P17040 1043 aaPredicted RBP19.04■□□□□ 0.64
RAB39A-201ENST00000320578 NSFP46459 744 aaKnown RBP19.04■□□□□ 0.64
RAB39A-201ENST00000320578 NOMO3P69849 1222 aa19.04■□□□□ 0.64
RAB39A-201ENST00000320578 PTPN11Q06124 597 aaPredicted RBP19.04■□□□□ 0.64
RAB39A-201ENST00000320578 UBXN11Q5T124 520 aa19.04■□□□□ 0.64
RAB39A-201ENST00000320578 GDF6Q6KF10 455 aaPredicted RBP19.04■□□□□ 0.64
RAB39A-201ENST00000320578 ZNF653Q96CK0 615 aa19.04■□□□□ 0.64
RAB39A-201ENST00000320578 KIF12Q96FN5 646 aa19.04■□□□□ 0.64
RAB39A-201ENST00000320578 TRIM6Q9C030 488 aaPredicted RBP19.04■□□□□ 0.64
RAB39A-201ENST00000320578 PDCL3Q9H2J4 239 aa19.04■□□□□ 0.64
RAB39A-201ENST00000320578 RAB21Q9UL25 225 aa19.04■□□□□ 0.64
RAB39A-201ENST00000320578 PIN4Q9Y237 131 aaKnown RBP19.04■□□□□ 0.64
RAB39A-201ENST00000320578 MIF4GDA9UHW6 222 aaKnown RBP19.03■□□□□ 0.64
RAB39A-201ENST00000320578 THAP12O43422 761 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 TRPA1O75762 1119 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 CLSTN1O94985 981 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 ASGR1P07306 291 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 CDH5P33151 784 aaPredicted RBP19.03■□□□□ 0.64
RAB39A-201ENST00000320578 PRMT2P55345 433 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 C1QBPQ07021 282 aaKnown RBP19.03■□□□□ 0.64
RAB39A-201ENST00000320578 KCNA10Q16322 511 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 WDR72Q3MJ13 1102 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 MON1BQ7L1V2 547 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 PDCL2Q8N4E4 241 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 SPATA4Q8NEY3 305 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 ACTRT1Q8TDG2 376 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 PPP1R13LQ8WUF5 828 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 CYFIP2Q96F07 1278 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 HPDLQ96IR7 371 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 CHST12Q9NRB3 414 aa19.03■□□□□ 0.64
RAB39A-201ENST00000320578 DDX20Q9UHI6 824 aaKnown RBP19.03■□□□□ 0.64
RAB39A-201ENST00000320578 TTC7AQ9ULT0 858 aaPredicted RBP19.03■□□□□ 0.64
RAB39A-201ENST00000320578 TARSL2A2RTX5 802 aaKnown RBP19.02■□□□□ 0.64
RAB39A-201ENST00000320578 KCNE1P15382 129 aa19.02■□□□□ 0.64
RAB39A-201ENST00000320578 ELNP15502 786 aa19.02■□□□□ 0.64
RAB39A-201ENST00000320578 POLR2BP30876 1174 aaKnown RBP19.02■□□□□ 0.64
RAB39A-201ENST00000320578 LIN9Q5TKA1 542 aa19.02■□□□□ 0.64
RAB39A-201ENST00000320578 RASGEF1CQ8N431 466 aa19.02■□□□□ 0.64
RAB39A-201ENST00000320578 LRRC52Q8N7C0 313 aa19.02■□□□□ 0.64
RAB39A-201ENST00000320578 NOA1Q8NC60 698 aaKnown RBP19.02■□□□□ 0.64
RAB39A-201ENST00000320578 BEST2Q8NFU1 509 aa19.02■□□□□ 0.64
RAB39A-201ENST00000320578 ZNF564Q8TBZ8 553 aaPredicted RBP19.02■□□□□ 0.64
RAB39A-201ENST00000320578 CD99L2Q8TCZ2 262 aa19.02■□□□□ 0.64
RAB39A-201ENST00000320578 RUBCNQ92622 972 aa19.02■□□□□ 0.64
RAB39A-201ENST00000320578 NUP85Q9BW27 656 aa19.02■□□□□ 0.64
RAB39A-201ENST00000320578 ANKZF1Q9H8Y5 726 aa19.02■□□□□ 0.64
RAB39A-201ENST00000320578 CNOT8Q9UFF9 292 aaKnown RBP19.02■□□□□ 0.64
RAB39A-201ENST00000320578 AGAP1Q9UPQ3 857 aa19.02■□□□□ 0.64
RAB39A-201ENST00000320578 RALGAPA2Q2PPJ7 1873 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 MED7O43513 233 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 XPOTO43592 962 aaKnown RBP19.02■□□□□ 0.63
RAB39A-201ENST00000320578 WEE2P0C1S8 567 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 CXCR5P32302 372 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 MYO1EQ12965 1108 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 BRD3Q15059 726 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 CLUL1Q15846 466 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 NAA35Q5VZE5 725 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 FBXO38Q6PIJ6 1188 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 RNF180Q86T96 592 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 FAM228AQ86W67 206 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 PARD6BQ9BYG5 372 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 LHX5Q9H2C1 402 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 NXF1Q9UBU9 619 aaKnown RBP19.02■□□□□ 0.63
RAB39A-201ENST00000320578 UBQLN1Q9UMX0 589 aaKnown RBP19.02■□□□□ 0.63
RAB39A-201ENST00000320578 POLIQ9UNA4 740 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.02■□□□□ 0.63
RAB39A-201ENST00000320578 ALG6Q9Y672 507 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 CDY2AQ9Y6F7 541 aa19.02■□□□□ 0.63
RAB39A-201ENST00000320578 KCNK3O14649 394 aa19.01■□□□□ 0.63
RAB39A-201ENST00000320578 CILPO75339 1184 aa19.01■□□□□ 0.63
RAB39A-201ENST00000320578 RECQL4O94761 1208 aa19.01■□□□□ 0.63
RAB39A-201ENST00000320578 CD4P01730 458 aa19.01■□□□□ 0.63
RAB39A-201ENST00000320578 CD58P19256 250 aa19.01■□□□□ 0.63
RAB39A-201ENST00000320578 CYP3A5P20815 502 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms