RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 OLFML2BQ68BL8 750 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 CYP4F22Q6NT55 531 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 RASSF3Q86WH2 238 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 FAF2Q96CS3 445 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 ZFP91Q96JP5 570 aaPredicted RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 MST1RQ04912 1400 aa9.25□□□□□ -0.93
COL6A5-202ENST00000312481 COL5A2P05997 1499 aaPredicted RBP9.25□□□□□ -0.93
COL6A5-202ENST00000312481 TCP11X1B4DZS4 312 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 SFSWAPQ12872 951 aaKnown RBP9.24□□□□□ -0.93
COL6A5-202ENST00000312481 TRIM60Q495X7 471 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 ZNF394Q53GI3 561 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 LRRC8EQ6NSJ5 796 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 CYB5D1Q6P9G0 228 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 AENQ8WTP8 325 aaKnown RBP9.24□□□□□ -0.93
COL6A5-202ENST00000312481 UBE2OQ9C0C9 1292 aaKnown RBP9.24□□□□□ -0.93
COL6A5-202ENST00000312481 GANQ9H2C0 597 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 ZC4H2Q9NQZ6 224 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 IQCA1LA6NCM1 817 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 TNFAIP8O95379 198 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 STXBP2Q15833 593 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 CCNG2Q16589 344 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 CCT7Q99832 543 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 NRDE2Q9H7Z3 1164 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 PARVBQ9HBI1 364 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 RIC8BQ9NVN3 520 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 CHCHD3Q9NX63 227 aaKnown RBP9.24□□□□□ -0.93
COL6A5-202ENST00000312481 PCYOX1Q9UHG3 505 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 DRG1Q9Y295 367 aaKnown RBP9.24□□□□□ -0.93
COL6A5-202ENST00000312481 TMX2Q9Y320 296 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 FRMPD4Q14CM0 1322 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 CNTNAP5Q8WYK1 1306 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 TESPA1A2RU30 521 aaPredicted RBP9.24□□□□□ -0.93
COL6A5-202ENST00000312481 NPTXRO95502 500 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 SESN3P58005 492 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 GCNT1Q02742 428 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 NFIL3Q16649 462 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 C19orf60Q96EN9 201 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 GMCL1Q96IK5 515 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 OPLAHO14841 1288 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 LRRN2O75325 713 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 SEC31AO94979 1220 aaKnown RBP9.24□□□□□ -0.93
COL6A5-202ENST00000312481 TGFB3P10600 412 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 IZUMO3Q5VZ72 239 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 YIPF3Q9GZM5 350 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 ADSLP30566 484 aaPredicted RBP9.24□□□□□ -0.93
COL6A5-202ENST00000312481 STRIP1Q5VSL9 837 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 GMCL1P1Q8NEA9 526 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 VPS37AQ8NEZ2 397 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 RNF139Q8WU17 664 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 CALN1Q9BXU9 219 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 PCDH9Q9HC56 1237 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 TRPC5Q9UL62 973 aaPredicted RBP9.24□□□□□ -0.93
COL6A5-202ENST00000312481 PEAK1Q9H792 1746 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 EXTL3O43909 919 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 FTCDO95954 541 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 TGM2P21980 687 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 IREB2P48200 963 aaKnown RBP9.24□□□□□ -0.93
COL6A5-202ENST00000312481 RPS6KA3P51812 740 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 FAM133BQ5BKY9 247 aaKnown RBP9.24□□□□□ -0.93
COL6A5-202ENST00000312481 NFRKBQ6P4R8 1299 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 REXO1L1PQ8IX06 675 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 MASTLQ96GX5 879 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 JPH1Q9HDC5 661 aaPredicted RBP9.24□□□□□ -0.93
COL6A5-202ENST00000312481 SSU72Q9NP77 194 aaKnown RBP9.24□□□□□ -0.93
COL6A5-202ENST00000312481 NUB1Q9Y5A7 615 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 ARAP2Q8WZ64 1704 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 DNAJA2O60884 412 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 RAD23BP54727 409 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 MAP3K7CLP57077 242 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 RCN2Q14257 317 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 MTFR1Q15390 333 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 PPP2R3CQ969Q6 453 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 ZSWIM1Q9BR11 485 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 OSBPL10Q9BXB5 764 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 SLC13A4Q9UKG4 626 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 C5P01031 1676 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 ANGPT2O15123 496 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 OAZ1P54368 228 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 ZNF543Q08ER8 600 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 VAT1Q99536 393 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 OLFM1Q99784 485 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 GOLPH3Q9H4A6 298 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 TMBIM4Q9HC24 238 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 CD209Q9NNX6 404 aa9.24□□□□□ -0.93
COL6A5-202ENST00000312481 ADCY3O60266 1144 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 NUP214P35658 2090 aaPredicted RBP9.23□□□□□ -0.93
COL6A5-202ENST00000312481 MAPK9P45984 424 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 MFSD5Q6N075 450 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 JAMLQ86YT9 394 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 SLC9A9Q8IVB4 645 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 CEP19Q96LK0 163 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 DNAJB4Q9UDY4 337 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 NOD1Q9Y239 953 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 PRR23AA6NEV1 266 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 THRAP10827 490 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 IBSPP21815 317 aaPredicted RBP9.23□□□□□ -0.93
COL6A5-202ENST00000312481 RPS12P25398 132 aaKnown RBP9.23□□□□□ -0.93
COL6A5-202ENST00000312481 PTPN4P29074 926 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 PDXDC2PQ6P474 469 aa9.23□□□□□ -0.93
COL6A5-202ENST00000312481 ATG9AQ7Z3C6 839 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms