RNA–Protein interactions for RNA: ENST00000307635.3

ZNF556-201, Transcript of zinc finger protein 556, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF556, Length 6,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556-201ENST00000307635 CRYBB1P53674 252 aaPredicted RBP11.11□□□□□ -0.63
ZNF556-201ENST00000307635 PDGFDQ9GZP0 370 aaPredicted RBP11.11□□□□□ -0.63
ZNF556-201ENST00000307635 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.11□□□□□ -0.63
ZNF556-201ENST00000307635 PTPN22Q9Y2R2 807 aa11.11□□□□□ -0.63
ZNF556-201ENST00000307635 HEY1Q9Y5J3 304 aa11.11□□□□□ -0.63
ZNF556-201ENST00000307635 CCDC151A5D8V7 595 aa11.11□□□□□ -0.63
ZNF556-201ENST00000307635 CXCL14O95715 111 aa11.11□□□□□ -0.63
ZNF556-201ENST00000307635 RFC2P35250 354 aa11.11□□□□□ -0.63
ZNF556-201ENST00000307635 PRAMEP78395 509 aa11.11□□□□□ -0.63
ZNF556-201ENST00000307635 EHHADHQ08426 723 aa11.11□□□□□ -0.63
ZNF556-201ENST00000307635 WASHC5Q12768 1159 aa11.11□□□□□ -0.63
ZNF556-201ENST00000307635 SNX1Q13596 522 aa11.11□□□□□ -0.63
ZNF556-201ENST00000307635 THEMIS2Q5TEJ8 643 aa11.11□□□□□ -0.63
ZNF556-201ENST00000307635 MCUQ8NE86 351 aa11.11□□□□□ -0.63
ZNF556-201ENST00000307635 NFKBIZQ9BYH8 718 aa11.11□□□□□ -0.63
ZNF556-201ENST00000307635 SPG21Q9NZD8 308 aa11.11□□□□□ -0.63
ZNF556-201ENST00000307635 EIF4E1BA6NMX2 242 aaKnown RBP11.1□□□□□ -0.63
ZNF556-201ENST00000307635 ASS1P00966 412 aaKnown RBP11.1□□□□□ -0.63
ZNF556-201ENST00000307635 NOP14P78316 857 aaKnown RBP11.1□□□□□ -0.63
ZNF556-201ENST00000307635 ATRIPQ8WXE1 791 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 SPATA16Q9BXB7 569 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 TCRBV5S4A2TA0A5A2 114 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 LUC7L3O95232 432 aaKnown RBP11.1□□□□□ -0.63
ZNF556-201ENST00000307635 TRIM49P0CI25 452 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 TRIM49CP0CI26 452 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 SOX10P56693 466 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 ATAT1Q5SQI0 421 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 PLPPR4Q7Z2D5 763 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 HDXQ7Z353 690 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 PPHLN1Q8NEY8 458 aaKnown RBP11.1□□□□□ -0.63
ZNF556-201ENST00000307635 ANKRD26Q9UPS8 1709 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 PODXLO00592 558 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 EIF4A3P38919 411 aaKnown RBP11.1□□□□□ -0.63
ZNF556-201ENST00000307635 PRCPP42785 496 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 NSUN2Q08J23 767 aaKnown RBP eCLIP11.1□□□□□ -0.63
ZNF556-201ENST00000307635 TTC19Q6DKK2 380 aaPredicted RBP11.1□□□□□ -0.63
ZNF556-201ENST00000307635 CEP120Q8N960 986 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 MIF4GDA9UHW6 222 aaKnown RBP11.1□□□□□ -0.63
ZNF556-201ENST00000307635 GTF2H1P32780 548 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 ROR1Q01973 937 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 TSPAN18Q96SJ8 248 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 NUP85Q9BW27 656 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.1□□□□□ -0.63
ZNF556-201ENST00000307635 COL1A1P02452 1464 aaPredicted RBP11.1□□□□□ -0.63
ZNF556-201ENST00000307635 GLUD1P00367 558 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 UBA1P22314 1058 aaKnown RBP11.1□□□□□ -0.63
ZNF556-201ENST00000307635 BCAR1P56945 870 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 RTP1P59025 263 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 STX1BP61266 288 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 DUSP28Q4G0W2 176 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 WDR49Q8IV35 697 aa11.1□□□□□ -0.63
ZNF556-201ENST00000307635 HSPA8P11142 646 aaKnown RBP11.09□□□□□ -0.63
ZNF556-201ENST00000307635 RBL2Q08999 1139 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 ANKRD40Q6AI12 368 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 SPACA7Q96KW9 195 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 MKNK1Q9BUB5 465 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 OXCT2Q9BYC2 517 aaPredicted RBP11.09□□□□□ -0.63
ZNF556-201ENST00000307635 NHEJ1Q9H9Q4 299 aaPredicted RBP11.09□□□□□ -0.63
ZNF556-201ENST00000307635 FAM114A2Q9NRY5 505 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 KRT82Q9NSB4 513 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 PCSK1NQ9UHG2 260 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 PFKMP08237 780 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 ATP11AP98196 1134 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 FBXO47Q5MNV8 452 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 ALKBH5Q6P6C2 394 aaKnown RBP11.09□□□□□ -0.63
ZNF556-201ENST00000307635 MTHFD1LQ6UB35 978 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 TRIM42Q8IWZ5 723 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 RGL4Q8IZJ4 473 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 TMEM86AQ8N2M4 240 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 ZNF564Q8TBZ8 553 aaPredicted RBP11.09□□□□□ -0.63
ZNF556-201ENST00000307635 CGRRF1Q99675 332 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
ZNF556-201ENST00000307635 PCDHB9Q9Y5E1 797 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 CNTNAP2Q9UHC6 1331 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 PRR23AA6NEV1 266 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 NVLO15381 856 aaKnown RBP11.09□□□□□ -0.63
ZNF556-201ENST00000307635 PSMC6P62333 389 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 CCDC62Q6P9F0 684 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 C11orf84Q9BUA3 381 aaPredicted RBP11.09□□□□□ -0.63
ZNF556-201ENST00000307635 CIPCQ9C0C6 399 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 ZRANB2O95218 330 aaKnown RBP eCLIP11.09□□□□□ -0.63
ZNF556-201ENST00000307635 PLPP4Q5VZY2 271 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 ZNF677Q86XU0 584 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.09□□□□□ -0.63
ZNF556-201ENST00000307635 GJB4Q9NTQ9 266 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 PCDHA13Q9Y5I0 950 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 PGRMC1O00264 195 aaKnown RBP11.09□□□□□ -0.63
ZNF556-201ENST00000307635 MSH2P43246 934 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 SGCGQ13326 291 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 TTC8Q8TAM2 541 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 CYP3A43Q9HB55 503 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 BCAP29Q9UHQ4 241 aa11.09□□□□□ -0.63
ZNF556-201ENST00000307635 HMGB1P1B2RPK0 211 aaPredicted RBP11.08□□□□□ -0.64
ZNF556-201ENST00000307635 MMP3P08254 477 aa11.08□□□□□ -0.64
ZNF556-201ENST00000307635 MAPTP10636 758 aaKnown RBP11.08□□□□□ -0.64
ZNF556-201ENST00000307635 BCAT1P54687 386 aa11.08□□□□□ -0.64
ZNF556-201ENST00000307635 ANTXR2P58335 489 aa11.08□□□□□ -0.64
ZNF556-201ENST00000307635 PTPN11Q06124 597 aaPredicted RBP11.08□□□□□ -0.64
ZNF556-201ENST00000307635 FNDC3BQ53EP0 1204 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms