RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 MMEP08473 750 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 H2AFZP0C0S5 128 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 P4HA1P13674 534 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 CHRNB2P17787 502 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 CASQ1P31415 396 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 FMO1Q01740 532 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 MYO1EQ12965 1108 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 H2AFVQ71UI9 128 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 LRRC8DQ7L1W4 858 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 SLC35F6Q8N357 371 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 FAXDC2Q96IV6 333 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 CNTN6Q9UQ52 1028 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 TRIP11Q15643 1979 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 PDCD11Q14690 1871 aaKnown RBP13.9□□□□□ -0.18
CCDC7-202ENST00000302316 MEIS3P2A8K0S8 358 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 FANCGO15287 622 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 PQBP1O60828 265 aaKnown RBP13.9□□□□□ -0.18
CCDC7-202ENST00000302316 STAU1O95793 577 aaKnown RBP13.9□□□□□ -0.18
CCDC7-202ENST00000302316 CD4P01730 458 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 TFRCP02786 760 aaKnown RBP13.9□□□□□ -0.18
CCDC7-202ENST00000302316 IBSPP21815 317 aaPredicted RBP13.9□□□□□ -0.18
CCDC7-202ENST00000302316 GNA15P30679 374 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 MLH1P40692 756 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 RAP1GAPP47736 663 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 TNNC1P63316 161 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 BFSP2Q13515 415 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 DSC3Q14574 896 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 MBTPS1Q14703 1052 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 ZNF677Q86XU0 584 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 DDX1Q92499 740 aaKnown RBP13.9□□□□□ -0.18
CCDC7-202ENST00000302316 LPPQ93052 612 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 ZFP42Q96MM3 310 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 RPS6KC1Q96S38 1066 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 ADAM2Q99965 735 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 BCO2Q9BYV7 579 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 SMYD3Q9H7B4 428 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 TAS2R14Q9NYV8 317 aa13.9□□□□□ -0.18
CCDC7-202ENST00000302316 FAM170AA1A519 330 aa13.89□□□□□ -0.19
CCDC7-202ENST00000302316 PPEF2O14830 753 aa13.89□□□□□ -0.19
CCDC7-202ENST00000302316 SELPP16109 830 aa13.89□□□□□ -0.19
CCDC7-202ENST00000302316 ZNF132P52740 706 aa13.89□□□□□ -0.19
CCDC7-202ENST00000302316 ATN1P54259 1190 aaPredicted RBP13.89□□□□□ -0.19
CCDC7-202ENST00000302316 ZNF394Q53GI3 561 aa13.89□□□□□ -0.19
CCDC7-202ENST00000302316 PCDHB18PQ96TA0 734 aa13.89□□□□□ -0.19
CCDC7-202ENST00000302316 TRAIPQ9BWF2 469 aa13.89□□□□□ -0.19
CCDC7-202ENST00000302316 CRISPLD2Q9H0B8 497 aa13.89□□□□□ -0.19
CCDC7-202ENST00000302316 PTGESO14684 152 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 MOCS3O95396 460 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 LBX1P52954 281 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 NAP1L1P55209 391 aaKnown RBP13.88□□□□□ -0.19
CCDC7-202ENST00000302316 C9orf57Q5W0N0 161 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 LRRC52Q8N7C0 313 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 RNF169Q8NCN4 708 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 GAD1Q99259 594 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 SDCBP2Q9H190 292 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 PDCL3Q9H2J4 239 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 GOLGA2P5Q9HBQ8 144 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 PUF60Q9UHX1 559 aaKnown RBP13.88□□□□□ -0.19
CCDC7-202ENST00000302316 INTUQ9ULD6 942 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 GIT1Q9Y2X7 761 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 A0A0U1RQF3 1178 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 THAP12O43422 761 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 BUB1O43683 1085 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 ZNF623O75123 536 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 TACC1O75410 805 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 ATF7P17544 494 aaPredicted RBP13.88□□□□□ -0.19
CCDC7-202ENST00000302316 CYP3A5P20815 502 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 GALCP54803 685 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 CDH8P55286 799 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 AGMOQ6ZNB7 445 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 MRPL10Q7Z7H8 261 aaKnown RBP13.88□□□□□ -0.19
CCDC7-202ENST00000302316 ZNF560Q96MR9 790 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 ALS2CR12Q96Q35 445 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 PPP1R10Q96QC0 940 aaKnown RBP13.88□□□□□ -0.19
CCDC7-202ENST00000302316 MMS19Q96T76 1030 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 CYP3A43Q9HB55 503 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 SALL4Q9UJQ4 1053 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 CAPN6Q9Y6Q1 641 aa13.88□□□□□ -0.19
CCDC7-202ENST00000302316 ANO9A1A5B4 782 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 SKIP12755 728 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 ABCB4P21439 1286 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 MNX1P50219 401 aaPredicted RBP13.87□□□□□ -0.19
CCDC7-202ENST00000302316 SOX4Q06945 474 aaPredicted RBP13.87□□□□□ -0.19
CCDC7-202ENST00000302316 SMYD5Q6GMV2 418 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 TRIM58Q8NG06 486 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 CTNNBL1Q8WYA6 563 aaPredicted RBP13.87□□□□□ -0.19
CCDC7-202ENST00000302316 ARMC5Q96C12 935 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 PGBD4Q96DM1 585 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 NOX5Q96PH1 765 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 RSAD1Q9HA92 442 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 SLC38A7Q9NVC3 462 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 SNX9Q9Y5X1 595 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 CTAGE9A4FU28 777 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 ARL5CA6NH57 179 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 BTNL10A8MVZ5 291 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 RTN2O75298 545 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 FTLP02792 175 aaPredicted RBP13.87□□□□□ -0.19
CCDC7-202ENST00000302316 TMEM253P0C7T8 217 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 GZMAP12544 262 aa13.87□□□□□ -0.19
CCDC7-202ENST00000302316 PKN2Q16513 984 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms