RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 DESI2Q9BSY9 194 aa26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 ELAC1Q9H777 363 aaKnown RBP26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 PPP2R2CQ9Y2T4 447 aa26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 REXO2Q9Y3B8 237 aaKnown RBP26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 R3HCC1Q9Y3T6 440 aaKnown RBP26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.41■■□□□ 1.82
GTF2A1-201ENST00000298173 TTC3P53804 2025 aa26.4■■□□□ 1.82
GTF2A1-201ENST00000298173 TRIM43BA6NCK2 446 aa26.4■■□□□ 1.82
GTF2A1-201ENST00000298173 TDRD15B5MCY1 1934 aaKnown RBP26.4■■□□□ 1.82
GTF2A1-201ENST00000298173 ZNF263O14978 683 aa26.4■■□□□ 1.82
GTF2A1-201ENST00000298173 KIF11P52732 1056 aa26.4■■□□□ 1.82
GTF2A1-201ENST00000298173 CRIPAKQ8N1N5 446 aa26.4■■□□□ 1.82
GTF2A1-201ENST00000298173 RNF169Q8NCN4 708 aa26.4■■□□□ 1.82
GTF2A1-201ENST00000298173 TRIM43Q96BQ3 446 aaPredicted RBP26.4■■□□□ 1.82
GTF2A1-201ENST00000298173 NXF1Q9UBU9 619 aaKnown RBP26.4■■□□□ 1.82
GTF2A1-201ENST00000298173 POLIQ9UNA4 740 aa26.4■■□□□ 1.82
GTF2A1-201ENST00000298173 USP27XA6NNY8 438 aa26.39■■□□□ 1.82
GTF2A1-201ENST00000298173 TIMP1P01033 207 aa26.39■■□□□ 1.82
GTF2A1-201ENST00000298173 ITGB8P26012 769 aa26.39■■□□□ 1.82
GTF2A1-201ENST00000298173 ANXA13P27216 316 aa26.39■■□□□ 1.82
GTF2A1-201ENST00000298173 USP8P40818 1118 aa26.39■■□□□ 1.82
GTF2A1-201ENST00000298173 SCNN1GP51170 649 aa26.39■■□□□ 1.82
GTF2A1-201ENST00000298173 MYO1EQ12965 1108 aa26.39■■□□□ 1.82
GTF2A1-201ENST00000298173 GOLGA2P5Q9HBQ8 144 aa26.39■■□□□ 1.82
GTF2A1-201ENST00000298173 SPTLC3Q9NUV7 552 aa26.39■■□□□ 1.82
GTF2A1-201ENST00000298173 TMEM161AQ9NX61 479 aa26.39■■□□□ 1.82
GTF2A1-201ENST00000298173 AKR1B10O60218 316 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 RFC2P35250 354 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 REXO1L1PQ8IX06 675 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 ACRBPQ8NEB7 543 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 ADAMTS1Q9UHI8 967 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 MKI67P46013 3256 aaKnown RBP26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 A0A087X0T9 212 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 WEE2P0C1S8 567 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 CCDC175P0C221 793 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 FAM228BP0C875 321 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 ZNF132P52740 706 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 SLC18A3Q16572 532 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 SLC47A2Q86VL8 602 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 SLC30A5Q8TAD4 765 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 SDCBP2Q9H190 292 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 DEF6Q9H4E7 631 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 FAM124BQ9H5Z6 455 aaPredicted RBP26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 CYP3A43Q9HB55 503 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 CISHQ9NSE2 258 aa26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 NOCTQ9UK39 431 aaKnown RBP26.38■■□□□ 1.81
GTF2A1-201ENST00000298173 GFPT1Q06210 699 aaPredicted RBP26.37■■□□□ 1.81
GTF2A1-201ENST00000298173 CLLU1OSQ5K130 101 aa26.37■■□□□ 1.81
GTF2A1-201ENST00000298173 DEFB128Q7Z7B8 93 aa26.37■■□□□ 1.81
GTF2A1-201ENST00000298173 EPS8L1Q8TE68 723 aa26.37■■□□□ 1.81
GTF2A1-201ENST00000298173 ACP6Q9NPH0 428 aa26.37■■□□□ 1.81
GTF2A1-201ENST00000298173 TRMT1Q9NXH9 659 aaKnown RBP26.37■■□□□ 1.81
GTF2A1-201ENST00000298173 NENFQ9UMX5 172 aa26.37■■□□□ 1.81
GTF2A1-201ENST00000298173 PCDHB4Q9Y5E5 795 aa26.37■■□□□ 1.81
GTF2A1-201ENST00000298173 ZSCAN12O43309 604 aa26.36■■□□□ 1.81
GTF2A1-201ENST00000298173 KRT5P13647 590 aa26.36■■□□□ 1.81
GTF2A1-201ENST00000298173 P4HA1P13674 534 aa26.36■■□□□ 1.81
GTF2A1-201ENST00000298173 CYP11B1P15538 503 aa26.36■■□□□ 1.81
GTF2A1-201ENST00000298173 PNPLA4P41247 253 aa26.36■■□□□ 1.81
GTF2A1-201ENST00000298173 GRIK3Q13003 919 aa26.36■■□□□ 1.81
GTF2A1-201ENST00000298173 BMS1Q14692 1282 aaKnown RBP26.36■■□□□ 1.81
GTF2A1-201ENST00000298173 TMEM270Q6UE05 265 aa26.36■■□□□ 1.81
GTF2A1-201ENST00000298173 DDX1Q92499 740 aaKnown RBP26.36■■□□□ 1.81
GTF2A1-201ENST00000298173 AGPAT1Q99943 283 aa26.36■■□□□ 1.81
GTF2A1-201ENST00000298173 MICAL3Q7RTP6 2002 aa26.36■■□□□ 1.81
GTF2A1-201ENST00000298173 DDX3XO00571 662 aaKnown RBP eCLIP26.35■■□□□ 1.814e-8■■■■□ 24.9
GTF2A1-201ENST00000298173 CLSTN1O94985 981 aa26.35■■□□□ 1.81
GTF2A1-201ENST00000298173 CDH8P55286 799 aa26.35■■□□□ 1.81
GTF2A1-201ENST00000298173 KRT83P78385 493 aa26.35■■□□□ 1.81
GTF2A1-201ENST00000298173 CYP27A1Q02318 531 aa26.35■■□□□ 1.81
GTF2A1-201ENST00000298173 NOP9Q86U38 636 aaKnown RBP26.35■■□□□ 1.81
GTF2A1-201ENST00000298173 PPP1R13BQ96KQ4 1090 aa26.35■■□□□ 1.81
GTF2A1-201ENST00000298173 GDAP2Q9NXN4 497 aa26.35■■□□□ 1.81
GTF2A1-201ENST00000298173 SPTLC1O15269 473 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 CCP110O43303 1012 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 POMCP01189 267 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 CHRNB2P17787 502 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 IBSPP21815 317 aaPredicted RBP26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 RPL9P32969 192 aaKnown RBP26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 BPIFB4P59827 614 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 LILRA4P59901 499 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 YWHAEP62258 255 aaKnown RBP26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 CNKSR3Q6P9H4 555 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 GLB1LQ6UWU2 654 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 SCARA5Q6ZMJ2 495 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 LIMS2Q7Z4I7 341 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 LNX1Q8TBB1 728 aaPredicted RBP26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 SLC20A1Q8WUM9 679 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 ZNF560Q96MR9 790 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 SMYD3Q9H7B4 428 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 ALPK3Q96L96 1907 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 KPNA7A9QM74 516 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 TAF6P49848 677 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 TNNC1P63316 161 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 RBBP8NLQ8NC74 664 aaPredicted RBP26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.34■■□□□ 1.815e-25■□□□□ 8.2
GTF2A1-201ENST00000298173 PCDHB7Q9Y5E2 793 aa26.34■■□□□ 1.81
GTF2A1-201ENST00000298173 A0A0U1RQJ8 604 aa26.33■■□□□ 1.81
GTF2A1-201ENST00000298173 FGFR1P11362 822 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms