RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 MTA2O94776 668 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 ITGB3P05106 788 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 RHOXF2BP0C7M4 288 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 CD58P19256 250 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 AXLP30530 894 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 YWHAEP62258 255 aaKnown RBP15.23■□□□□ 0.03
C9orf3-202ENST00000297979 C2orf54Q08AI8 447 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 SNX17Q15036 470 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 PTPROQ16827 1216 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 SCARA5Q6ZMJ2 495 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 NT5DC4Q86YG4 428 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 RHOXF2Q9BQY4 288 aa15.23■□□□□ 0.03
C9orf3-202ENST00000297979 KCNK3O14649 394 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 ATMINO43313 823 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-202ENST00000297979 THAP12O43422 761 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 PGK1P00558 417 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 CYP1A1P04798 512 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-202ENST00000297979 CLCN6P51797 869 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 CACNB2Q08289 660 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-202ENST00000297979 TRIM32Q13049 653 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 ZNF667Q5HYK9 610 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 C11orf63Q6NUN7 778 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 SPATA4Q8NEY3 305 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 FAXDC2Q96IV6 333 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 MS4A14Q96JA4 679 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 PBKQ96KB5 322 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 EHD2Q9NZN4 543 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 NKX3-2P78367 333 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 CAP1Q01518 475 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 CENPCQ03188 943 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 TAF2Q6P1X5 1199 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 CXorf38Q8TB03 319 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 TMEM40Q8WWA1 233 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 HES6Q96HZ4 224 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 SMARCAL1Q9NZC9 954 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 UVRAGQ9P2Y5 699 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 NXF1Q9UBU9 619 aaKnown RBP15.22■□□□□ 0.03
C9orf3-202ENST00000297979 SCN10AQ9Y5Y9 1956 aa15.22■□□□□ 0.03
C9orf3-202ENST00000297979 ATICP31939 592 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 NSFP46459 744 aaKnown RBP15.21■□□□□ 0.03
C9orf3-202ENST00000297979 CRYBB1P53674 252 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-202ENST00000297979 NAA35Q5VZE5 725 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 CXCL17Q6UXB2 119 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 TRIM11Q96F44 468 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 NUP85Q9BW27 656 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 EIF2AQ9BY44 585 aaKnown RBP15.21■□□□□ 0.03
C9orf3-202ENST00000297979 PLEKHA5Q9HAU0 1116 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 ITGA11Q9UKX5 1188 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 POLIQ9UNA4 740 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 WEE2P0C1S8 567 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 MMGT1Q8N4V1 131 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 ZNF564Q8TBZ8 553 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-202ENST00000297979 CPA5Q8WXQ8 436 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 CYFIP2Q96F07 1278 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 KIF12Q96FN5 646 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 BCO2Q9BYV7 579 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 SNTG2Q9NY99 539 aa15.21■□□□□ 0.03
C9orf3-202ENST00000297979 CNOT8Q9UFF9 292 aaKnown RBP15.21■□□□□ 0.03
C9orf3-202ENST00000297979 MYBL1P10243 752 aa15.21■□□□□ 0.02
C9orf3-202ENST00000297979 WDR72Q3MJ13 1102 aa15.21■□□□□ 0.02
C9orf3-202ENST00000297979 PPP1R2P3Q6NXS1 205 aa15.21■□□□□ 0.02
C9orf3-202ENST00000297979 MCOLN2Q8IZK6 566 aa15.21■□□□□ 0.02
C9orf3-202ENST00000297979 PNKPQ96T60 521 aa15.21■□□□□ 0.02
C9orf3-202ENST00000297979 SELENOOQ9BVL4 669 aa15.21■□□□□ 0.02
C9orf3-202ENST00000297979 TRIM6Q9C030 488 aaPredicted RBP15.21■□□□□ 0.02
C9orf3-202ENST00000297979 VRTNQ9H8Y1 702 aa15.21■□□□□ 0.02
C9orf3-202ENST00000297979 CHORDC1Q9UHD1 332 aaPredicted RBP15.21■□□□□ 0.02
C9orf3-202ENST00000297979 GTF2IRD1Q9UHL9 959 aa15.21■□□□□ 0.02
C9orf3-202ENST00000297979 RAB21Q9UL25 225 aa15.21■□□□□ 0.02
C9orf3-202ENST00000297979 PIN4Q9Y237 131 aaKnown RBP15.21■□□□□ 0.02
C9orf3-202ENST00000297979 DERAQ9Y315 318 aa15.21■□□□□ 0.02
C9orf3-202ENST00000297979 ADAMTS4O75173 837 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 TUBBP07437 444 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 POLR2BP30876 1174 aaKnown RBP15.2■□□□□ 0.02
C9orf3-202ENST00000297979 YARSP54577 528 aaKnown RBP15.2■□□□□ 0.02
C9orf3-202ENST00000297979 NOMO3P69849 1222 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 PASD1Q8IV76 773 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 TMEM130Q8N3G9 435 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 ZNF606Q8WXB4 792 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 SNX27Q96L92 541 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 XPNPEP3Q9NQH7 507 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 RNF186Q9NXI6 227 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 DPP3Q9NY33 737 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 CFHP08603 1231 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 PRKAR2AP13861 404 aaKnown RBP15.2■□□□□ 0.02
C9orf3-202ENST00000297979 ZNF394Q53GI3 561 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 AVENQ9NQS1 362 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-202ENST00000297979 AGAP1Q9UPQ3 857 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 ALG6Q9Y672 507 aa15.2■□□□□ 0.02
C9orf3-202ENST00000297979 P4HA1P13674 534 aa15.19■□□□□ 0.02
C9orf3-202ENST00000297979 ELNP15502 786 aa15.19■□□□□ 0.02
C9orf3-202ENST00000297979 CCND3P30281 292 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-202ENST00000297979 GUCY2FP51841 1108 aa15.19■□□□□ 0.02
C9orf3-202ENST00000297979 RBP5P82980 135 aa15.19■□□□□ 0.02
C9orf3-202ENST00000297979 BRD3Q15059 726 aa15.19■□□□□ 0.02
C9orf3-202ENST00000297979 CCDC70Q6NSX1 233 aa15.19■□□□□ 0.02
C9orf3-202ENST00000297979 TMCO3Q6UWJ1 677 aa15.19■□□□□ 0.02
C9orf3-202ENST00000297979 MON1BQ7L1V2 547 aa15.19■□□□□ 0.02
C9orf3-202ENST00000297979 CFHR5Q9BXR6 569 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms