RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 EDN1P05305 212 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 NEFHP12036 1026 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 GARTP22102 1010 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 NAMPTP43490 491 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 SNRPFP62306 86 aaKnown RBP9.89□□□□□ -0.83
PRDM9-201ENST00000296682 IRX5P78411 483 aaPredicted RBP9.89□□□□□ -0.83
PRDM9-201ENST00000296682 ATP11AP98196 1134 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 CUL1Q13616 776 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 LONRF1Q17RB8 773 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.89□□□□□ -0.83
PRDM9-201ENST00000296682 CALR3Q96L12 384 aaKnown RBP9.89□□□□□ -0.83
PRDM9-201ENST00000296682 TIPINQ9BVW5 301 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 HAPLN2Q9GZV7 340 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 CISHQ9NSE2 258 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 KLK14Q9P0G3 267 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 AGAP1Q9UPQ3 857 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 STXBP5LQ9Y2K9 1186 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 RRP15Q9Y3B9 282 aaKnown RBP9.89□□□□□ -0.83
PRDM9-201ENST00000296682 SBF1O95248 1867 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 MIF4GDA9UHW6 222 aaKnown RBP9.88□□□□□ -0.83
PRDM9-201ENST00000296682 F8VP50 259 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 SGK1O00141 431 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 P4HA2O15460 535 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 RPL21P46778 160 aaKnown RBP9.88□□□□□ -0.83
PRDM9-201ENST00000296682 PMS2P54278 862 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 IFT88Q13099 833 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 KYNUQ16719 465 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 ZNF667Q5HYK9 610 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 RUFY4Q6ZNE9 571 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 MCOLN2Q8IZK6 566 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 REPS2Q8NFH8 660 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 MIS12Q9H081 205 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 FAM49BQ9NUQ9 324 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 RBPJLQ9UBG7 517 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 GGT7Q9UJ14 662 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 NOCTQ9UK39 431 aaKnown RBP9.88□□□□□ -0.83
PRDM9-201ENST00000296682 GTF3C4Q9UKN8 822 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.88□□□□□ -0.83
PRDM9-201ENST00000296682 PASKQ96RG2 1323 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 CCL15-CCL14A0A0B4J2E2 113 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 GAS8O95995 478 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 ZSCAN5DPP0CG00 497 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 CCL15Q16663 113 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 CLEC16AQ2KHT3 1053 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 ZACNQ401N2 412 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 FAM47CQ5HY64 1035 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 MREGQ8N565 214 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 RDM1Q8NG50 284 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 TMC2Q8TDI7 906 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 CAVIN3Q969G5 261 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 VTI1AQ96AJ9 217 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 LENG1Q96BZ8 264 aaPredicted RBP9.88□□□□□ -0.83
PRDM9-201ENST00000296682 ATP6V1G3Q96LB4 118 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 SLITRK6Q9H5Y7 841 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 KIAA1586Q9HCI6 787 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 ARHGAP28Q9P2N2 729 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 ANAPC5Q9UJX4 755 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 CAND2O75155 1236 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 TOM1L1O75674 476 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 ATF2P15336 505 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 RFX1P22670 979 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 ZKSCAN8Q15776 578 aaPredicted RBP9.88□□□□□ -0.83
PRDM9-201ENST00000296682 OR6B2Q6IFH4 312 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 TTC27Q6P3X3 843 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 MFSD14AQ96MC6 490 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 PCYT2Q99447 389 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 SENP7Q9BQF6 1050 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 WNT8AQ9H1J5 351 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 MINDY3Q9H8M7 445 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 VPS37BQ9H9H4 285 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 C17orf75Q9HAS0 396 aa9.88□□□□□ -0.83
PRDM9-201ENST00000296682 STAM2O75886 525 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 PDGFRBP09619 1106 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 TCF4P15884 667 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 PSMA2P25787 234 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 OAZ1P54368 228 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 PSMC1P62191 440 aaKnown RBP9.87□□□□□ -0.83
PRDM9-201ENST00000296682 NFX1Q12986 1120 aaKnown RBP9.87□□□□□ -0.83
PRDM9-201ENST00000296682 UBAP2Q5T6F2 1119 aaKnown RBP9.87□□□□□ -0.83
PRDM9-201ENST00000296682 RIOX2Q8IUF8 465 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 DNERQ8NFT8 737 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 GDAP1Q8TB36 358 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 EPS8L3Q8TE67 593 aaKnown RBP9.87□□□□□ -0.83
PRDM9-201ENST00000296682 SYT17Q9BSW7 474 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 NGRNQ9NPE2 291 aaKnown RBP9.87□□□□□ -0.83
PRDM9-201ENST00000296682 SETD4Q9NVD3 440 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 TJP2Q9UDY2 1190 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 PARP2Q9UGN5 583 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 ADAMTS5Q9UNA0 930 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 GOLGA6L7A0A1B0GV03 622 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 SHOX2O60902 331 aaPredicted RBP9.87□□□□□ -0.83
PRDM9-201ENST00000296682 MYCP01106 439 aaPredicted RBP9.87□□□□□ -0.83
PRDM9-201ENST00000296682 CLTAP09496 248 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 GZMAP12544 262 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 ETS1P14921 441 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 COILP38432 576 aaPredicted RBP9.87□□□□□ -0.83
PRDM9-201ENST00000296682 TAS2R40P59535 323 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 TFDP1Q14186 410 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 OTUD6BQ8N6M0 293 aa9.87□□□□□ -0.83
PRDM9-201ENST00000296682 DDX23Q9BUQ8 820 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms