RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 NEDD9Q14511 834 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 PPP1R7Q15435 360 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 CELF3Q5SZQ8 465 aaKnown RBP12.54□□□□□ -0.4
RHO-201ENST00000296271 KAZNQ674X7 775 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 SLFN12LQ6IEE8 588 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 ENOSF1Q7L5Y1 443 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 OPTNQ96CV9 577 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 CDCA5Q96FF9 252 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 ADARB2Q9NS39 739 aaKnown RBP12.54□□□□□ -0.4
RHO-201ENST00000296271 SLC12A6Q9UHW9 1150 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 SIP14410 1827 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 F8VP50 259 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 TLR3O15455 904 aaKnown RBP12.53□□□□□ -0.4
RHO-201ENST00000296271 CXCL8P10145 99 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 PTGISQ16647 500 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 CYP1B1Q16678 543 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 QPCTQ16769 361 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 BRSK2Q8IWQ3 736 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 DHX37Q8IY37 1157 aaKnown RBP12.53□□□□□ -0.4
RHO-201ENST00000296271 WDTC1Q8N5D0 677 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 HAUS1Q96CS2 278 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 CXCL16Q9H2A7 254 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 E7EVH7 732 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 H0YCG3 227 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 PROSCO94903 275 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 ACSL3O95573 720 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 ASS1P00966 412 aaKnown RBP12.53□□□□□ -0.4
RHO-201ENST00000296271 HOXC6P09630 235 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 TXNP10599 105 aaKnown RBP12.53□□□□□ -0.4
RHO-201ENST00000296271 RFC5P40937 340 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 FAM160B1Q5W0V3 765 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.53□□□□□ -0.4
RHO-201ENST00000296271 CCDC114Q96M63 670 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 PABPC3Q9H361 631 aaKnown RBP12.53□□□□□ -0.4
RHO-201ENST00000296271 C10orf88Q9H8K7 445 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 CISHQ9NSE2 258 aa12.53□□□□□ -0.4
RHO-201ENST00000296271 FEZ2Q9UHY8 353 aaPredicted RBP12.53□□□□□ -0.4
RHO-201ENST00000296271 TOM1L1O75674 476 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 KRT19P08727 400 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 ETS1P14921 441 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 YBX3P16989 372 aaKnown RBP eCLIP12.52□□□□□ -0.4
RHO-201ENST00000296271 TMEM132AQ24JP5 1023 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 EFCAB12Q6NXP0 572 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 CPB2Q96IY4 423 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 MCEEQ96PE7 176 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 MMP19Q99542 508 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 TMEM134Q9H6X4 195 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 HMGXB4Q9UGU5 601 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 ASIC3Q9UHC3 531 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 CYTH4Q9UIA0 394 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 RASAL2Q9UJF2 1139 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 MTUS1Q9ULD2 1270 aa12.52□□□□□ -0.4
RHO-201ENST00000296271 GPR25O00155 361 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 ECEL1O95672 775 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 ZSCAN5DPP0CG00 497 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 CREB1P16220 341 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 IVDP26440 423 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 MTMR3Q13615 1198 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 ZFYVE27Q5T4F4 411 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 GPAT2Q6NUI2 795 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 CCDC62Q6P9F0 684 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 ERO1BQ86YB8 467 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 UBR7Q8N806 425 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 ART4Q93070 314 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 MRPL4Q9BYD3 311 aaKnown RBP12.52□□□□□ -0.41
RHO-201ENST00000296271 DCLK3Q9C098 648 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 LRRC19Q9H756 370 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 AVENQ9NQS1 362 aaPredicted RBP12.52□□□□□ -0.41
RHO-201ENST00000296271 SAE1Q9UBE0 346 aaPredicted RBP12.52□□□□□ -0.41
RHO-201ENST00000296271 CTNNAL1Q9UBT7 734 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 CPSF3Q9UKF6 684 aaKnown RBP12.52□□□□□ -0.41
RHO-201ENST00000296271 A0A0G2JMZ2 1700 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 LRRC37A2A6NM11 1700 aa12.52□□□□□ -0.41
RHO-201ENST00000296271 PIK3R2O00459 728 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
RHO-201ENST00000296271 ZNF286BP0CG31 522 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 IREB2P48200 963 aaKnown RBP12.51□□□□□ -0.41
RHO-201ENST00000296271 CDR1P51861 262 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 MAPK6Q16659 721 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 LONRF1Q17RB8 773 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 ZNF568Q3ZCX4 644 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 HP1BP3Q5SSJ5 553 aaPredicted RBP12.51□□□□□ -0.41
RHO-201ENST00000296271 MYCBPAPQ8TBZ2 947 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 CCT8L2Q96SF2 557 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 XYLT2Q9H1B5 865 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.51□□□□□ -0.41
RHO-201ENST00000296271 AGTPBP1Q9UPW5 1226 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 FAM169AQ9Y6X4 670 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 IVNS1ABPQ9Y6Y0 642 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 GOLGA8SH3BPF8 625 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 VTNP04004 478 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 NFICP08651 508 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 POTEJP0CG39 1038 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 ZNF132P52740 706 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 PPP2R2AP63151 447 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 KCTD2Q14681 263 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 DENND2CQ68D51 928 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 PLEKHA7Q6IQ23 1121 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 DENND1BQ6P3S1 775 aa12.51□□□□□ -0.41
RHO-201ENST00000296271 NLRP14Q86W24 1093 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms