RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 NLRC5Q86WI3 1866 aa17.08■□□□□ 0.33
MRPL55-201ENST00000295008 TSC2P49815 1807 aa17.08■□□□□ 0.33
MRPL55-201ENST00000295008 A0A1W2PQC6 194 aa17.08■□□□□ 0.32
MRPL55-201ENST00000295008 ALDH2P05091 517 aa17.08■□□□□ 0.32
MRPL55-201ENST00000295008 CA3P07451 260 aa17.08■□□□□ 0.32
MRPL55-201ENST00000295008 PBX1P40424 430 aa17.08■□□□□ 0.32
MRPL55-201ENST00000295008 BRCC3P46736 316 aa17.08■□□□□ 0.32
MRPL55-201ENST00000295008 ALDH7A1P49419 539 aaKnown RBP17.08■□□□□ 0.32
MRPL55-201ENST00000295008 LILRA4P59901 499 aa17.08■□□□□ 0.32
MRPL55-201ENST00000295008 DPY19L2P1Q6NXN4 242 aa17.08■□□□□ 0.32
MRPL55-201ENST00000295008 ARHGEF19Q8IW93 802 aa17.08■□□□□ 0.32
MRPL55-201ENST00000295008 CLP1Q92989 425 aaKnown RBP17.08■□□□□ 0.32
MRPL55-201ENST00000295008 PCMTD1Q96MG8 357 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-201ENST00000295008 NT5C1BQ96P26 610 aa17.08■□□□□ 0.32
MRPL55-201ENST00000295008 COLEC11Q9BWP8 271 aa17.08■□□□□ 0.32
MRPL55-201ENST00000295008 PBX4Q9BYU1 374 aa17.08■□□□□ 0.32
MRPL55-201ENST00000295008 POLIQ9UNA4 740 aa17.08■□□□□ 0.32
MRPL55-201ENST00000295008 NUB1Q9Y5A7 615 aa17.08■□□□□ 0.32
MRPL55-201ENST00000295008 KPNA7A9QM74 516 aa17.07■□□□□ 0.32
MRPL55-201ENST00000295008 I3L4J1 428 aa17.07■□□□□ 0.32
MRPL55-201ENST00000295008 AARSP49588 968 aaKnown RBP eCLIP17.07■□□□□ 0.32
MRPL55-201ENST00000295008 RAB30Q15771 203 aa17.07■□□□□ 0.32
MRPL55-201ENST00000295008 WDR72Q3MJ13 1102 aa17.07■□□□□ 0.32
MRPL55-201ENST00000295008 ZNF667Q5HYK9 610 aa17.07■□□□□ 0.32
MRPL55-201ENST00000295008 SCARA5Q6ZMJ2 495 aa17.07■□□□□ 0.32
MRPL55-201ENST00000295008 SLC39A11Q8N1S5 342 aa17.07■□□□□ 0.32
MRPL55-201ENST00000295008 TATDN2Q93075 761 aa17.07■□□□□ 0.32
MRPL55-201ENST00000295008 NIF3L1Q9GZT8 377 aa17.07■□□□□ 0.32
MRPL55-201ENST00000295008 PLCB1Q9NQ66 1216 aa17.07■□□□□ 0.32
MRPL55-201ENST00000295008 AAASQ9NRG9 546 aa17.07■□□□□ 0.32
MRPL55-201ENST00000295008 FAM207AQ9NSI2 230 aaPredicted RBP17.07■□□□□ 0.32
MRPL55-201ENST00000295008 NXF1Q9UBU9 619 aaKnown RBP17.07■□□□□ 0.32
MRPL55-201ENST00000295008 ADAM28Q9UKQ2 775 aa17.07■□□□□ 0.32
MRPL55-201ENST00000295008 SNX9Q9Y5X1 595 aa17.07■□□□□ 0.32
MRPL55-201ENST00000295008 SCN1AP35498 2009 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 CARNS1A5YM72 827 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 EPHB6O15197 1021 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 TADA2AO75478 443 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 CTNNB1P35222 781 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 MRE11P49959 708 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 TNNC1P63316 161 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 TIGD5Q53EQ6 642 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 PHLDB3Q6NSJ2 640 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 GJB7Q6PEY0 223 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 SPRED2Q7Z698 418 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 MRFAP1L1Q96HT8 127 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 IGSF21Q96ID5 467 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 C17orf80Q9BSJ5 609 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 GANQ9H2C0 597 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 NKX2-4Q9H2Z4 354 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 GDAP2Q9NXN4 497 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 SPG21Q9NZD8 308 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 APEX2Q9UBZ4 518 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 MSRAQ9UJ68 235 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 AJAP1Q9UKB5 411 aaPredicted RBP17.06■□□□□ 0.32
MRPL55-201ENST00000295008 PCDHB12Q9Y5F1 795 aa17.06■□□□□ 0.32
MRPL55-201ENST00000295008 SF3B1O75533 1304 aaKnown RBP eCLIP17.05■□□□□ 0.322e-7■■■■■ 129.2
MRPL55-201ENST00000295008 NOL4O94818 638 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 ADCY5O95622 1261 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 P4HA1P13674 534 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 PAX3P23760 479 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 PPM1AP35813 382 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 ASPAP45381 313 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 KLHDC7AQ5VTJ3 777 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 FUT10Q6P4F1 479 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 DSTYKQ6XUX3 929 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 RRAGAQ7L523 313 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 VSTM4Q8IW00 320 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 PPM1KQ8N3J5 372 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 NEK11Q8NG66 645 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 KAT5Q92993 513 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 SUSD3Q96L08 255 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 SENP8Q96LD8 212 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 ARID3AQ99856 593 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 SMYD3Q9H7B4 428 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 RWDD3Q9Y3V2 267 aa17.05■□□□□ 0.32
MRPL55-201ENST00000295008 ITIH6Q6UXX5 1313 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 A0A1W2PPC1 479 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 CYB561D2O14569 222 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 BMPR1AP36894 532 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 RAP1GAPP47736 663 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 SMAD3P84022 425 aaKnown RBP17.04■□□□□ 0.32
MRPL55-201ENST00000295008 TAP1Q03518 808 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 CUL2Q13617 745 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 IQCEQ6IPM2 695 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 TMEM169Q96HH4 297 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 MMS19Q96T76 1030 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 VN1R3Q9BXE9 311 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 BCO2Q9BYV7 579 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 GPR62Q9BZJ7 368 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 SDCBP2Q9H190 292 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 UBE2TQ9NPD8 197 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-201ENST00000295008 PCDHB8Q9UN66 801 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 L1RE1Q9UN81 338 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 COLQQ9Y215 455 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-201ENST00000295008 FHOD1Q9Y613 1164 aa17.04■□□□□ 0.32
MRPL55-201ENST00000295008 PLXNA4Q9HCM2 1894 aa17.03■□□□□ 0.32
MRPL55-201ENST00000295008 M0QZQ0 153 aa17.03■□□□□ 0.32
MRPL55-201ENST00000295008 TRAPPC3O43617 180 aa17.03■□□□□ 0.32
MRPL55-201ENST00000295008 HUS1O60921 280 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms