RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 COL4A3Q01955 1670 aa16.57■□□□□ 0.24
PDE6D-201ENST00000287600 SMIM28A0A1B0GU29 152 aa16.57■□□□□ 0.24
PDE6D-201ENST00000287600 AFMP43652 599 aa16.57■□□□□ 0.24
PDE6D-201ENST00000287600 SOX4Q06945 474 aaPredicted RBP16.57■□□□□ 0.24
PDE6D-201ENST00000287600 RSPO2Q6UXX9 243 aaPredicted RBP16.57■□□□□ 0.24
PDE6D-201ENST00000287600 MAP4K3Q8IVH8 894 aa16.57■□□□□ 0.24
PDE6D-201ENST00000287600 NPAS3Q8IXF0 933 aa16.57■□□□□ 0.24
PDE6D-201ENST00000287600 CEP57L1Q8IYX8 460 aa16.57■□□□□ 0.24
PDE6D-201ENST00000287600 DCBLD2Q96PD2 775 aa16.57■□□□□ 0.24
PDE6D-201ENST00000287600 KXD1Q9BQD3 176 aa16.57■□□□□ 0.24
PDE6D-201ENST00000287600 ST6GALNAC4Q9H4F1 302 aa16.57■□□□□ 0.24
PDE6D-201ENST00000287600 MAGEF1Q9HAY2 307 aa16.57■□□□□ 0.24
PDE6D-201ENST00000287600 DNMT3BQ9UBC3 853 aaKnown RBP16.57■□□□□ 0.24
PDE6D-201ENST00000287600 SERTAD1Q9UHV2 236 aa16.57■□□□□ 0.24
PDE6D-201ENST00000287600 R4GN57 208 aa16.57■□□□□ 0.24
PDE6D-201ENST00000287600 CFAP54Q96N23 3096 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 FRMD3A2A2Y4 597 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 PODXLO00592 558 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 GCNT3O95395 438 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 ASIC1P78348 528 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 MCL1Q07820 350 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 SNW1Q13573 536 aaKnown RBP16.56■□□□□ 0.24
PDE6D-201ENST00000287600 NOLC1Q14978 699 aaKnown RBP eCLIP16.56■□□□□ 0.24
PDE6D-201ENST00000287600 MLF2Q15773 248 aaPredicted RBP16.56■□□□□ 0.24
PDE6D-201ENST00000287600 SEZ6Q53EL9 994 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 ZC3H14Q6PJT7 736 aaKnown RBP16.56■□□□□ 0.24
PDE6D-201ENST00000287600 CD300LGQ6UXG3 332 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 ACAP3Q96P50 834 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 C7orf25Q9BPX7 421 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 BLZF1Q9H2G9 400 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 OLFML3Q9NRN5 406 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 DLGAP2Q9P1A6 1054 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 HPSEQ9Y251 543 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 MRPS23Q9Y3D9 190 aaKnown RBP16.56■□□□□ 0.24
PDE6D-201ENST00000287600 NUB1Q9Y5A7 615 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 NOTCH4Q99466 2003 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 MYH11P35749 1972 aa16.56■□□□□ 0.24
PDE6D-201ENST00000287600 PDCD11Q14690 1871 aaKnown RBP16.56■□□□□ 0.24
PDE6D-201ENST00000287600 FAM186AA6NE01 2351 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 A0A1W2PQ27 194 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 A0A1W2PQ64 194 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 A0A1W2PQD8 194 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 PRRG1O14668 218 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 PIGRP01833 764 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 LMNAP02545 664 aaKnown RBP16.55■□□□□ 0.24
PDE6D-201ENST00000287600 LRG1P02750 347 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 SLFN14P0C7P3 912 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 CASP1P29466 404 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 ELF1P32519 619 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 NDUFA8P51970 172 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 ARPP19P56211 112 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 STARD6P59095 220 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 PFKPQ01813 784 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 ROR1Q01973 937 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 XKR4Q5GH76 650 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 VARS2Q5ST30 1063 aaKnown RBP16.55■□□□□ 0.24
PDE6D-201ENST00000287600 RTL10Q7L3V2 364 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 C1orf210Q8IVY1 113 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 FSIP1Q8NA03 581 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 HVCN1Q96D96 273 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 ZMAT2Q96NC0 199 aaKnown RBP16.55■□□□□ 0.24
PDE6D-201ENST00000287600 HAPLN2Q9GZV7 340 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 SEMA4AQ9H3S1 761 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 PCDHB13Q9Y5F0 798 aa16.55■□□□□ 0.24
PDE6D-201ENST00000287600 PTPRZ1P23471 2315 aaPredicted RBP16.54■□□□□ 0.24
PDE6D-201ENST00000287600 PATJQ8NI35 1801 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 KANSL1LA0AUZ9 987 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 ANKRD63C9JTQ0 380 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 ACTN4O43707 911 aaKnown RBP16.54■□□□□ 0.24
PDE6D-201ENST00000287600 LRRN2O75325 713 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 PPP1R37O75864 691 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 RHOP08100 348 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 SYKP43405 635 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 CASP5P51878 434 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 PRKCQQ04759 706 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 KCNA1Q09470 495 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 UBXN2BQ14CS0 331 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 SLC8B1Q6J4K2 584 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 CNNM4Q6P4Q7 775 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 SLC39A4Q6P5W5 647 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 ALKAL1Q6UXT8 129 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 GRAMD1CQ8IYS0 662 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 HPS3Q969F9 1004 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 PAGE5Q96GU1 130 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 ACCSQ96QU6 501 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 STRA6Q9BX79 667 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 FGFBP2Q9BYJ0 223 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 IKZF4Q9H2S9 585 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 CNTN3Q9P232 1028 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 USP25Q9UHP3 1055 aa16.54■□□□□ 0.24
PDE6D-201ENST00000287600 A0A0B4J269 797 aa16.53■□□□□ 0.24
PDE6D-201ENST00000287600 FAM237AA0A1B0GTK4 181 aa16.53■□□□□ 0.24
PDE6D-201ENST00000287600 WDR27A2RRH5 827 aa16.53■□□□□ 0.24
PDE6D-201ENST00000287600 GOLGA6L4A6NEF3 574 aa16.53■□□□□ 0.24
PDE6D-201ENST00000287600 TISP43B9A030 160 aa16.53■□□□□ 0.24
PDE6D-201ENST00000287600 H7C4K7 107 aa16.53■□□□□ 0.24
PDE6D-201ENST00000287600 SYN3O14994 580 aa16.53■□□□□ 0.24
PDE6D-201ENST00000287600 CLTAP09496 248 aa16.53■□□□□ 0.24
PDE6D-201ENST00000287600 SP9P0CG40 484 aa16.53■□□□□ 0.24
PDE6D-201ENST00000287600 GLULP15104 373 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms