RNA–Protein interactions for RNA: ENST00000284041.7

SREK1-201, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 3,751 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-201ENST00000284041 CPA4Q9UI42 421 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 AGAP1Q9UPQ3 857 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 IKBKGQ9Y6K9 419 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 NPATQ14207 1427 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 TCRBV5S2A0A599 114 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 PLOD2O00469 737 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 TYRP14679 529 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 GSPT1P15170 499 aaKnown RBP4.33□□□□□ -1.72
SREK1-201ENST00000284041 RPS6KA3P51812 740 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 CACNB3P54284 484 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 BPIFB3P59826 476 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 PRAMEF9Q5VWM5 478 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 IRGCQ6NXR0 463 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 CPLX2Q6PUV4 134 aaKnown RBP4.33□□□□□ -1.72
SREK1-201ENST00000284041 TMEM130Q8N3G9 435 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 SPATA5Q8NB90 893 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 TEKT4Q8WW24 435 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 LRRC45Q96CN5 670 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 MAELQ96JY0 434 aaKnown RBP4.33□□□□□ -1.72
SREK1-201ENST00000284041 XPO4Q9C0E2 1151 aaKnown RBP4.33□□□□□ -1.72
SREK1-201ENST00000284041 CCDC39Q9UFE4 941 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 MYPNQ86TC9 1320 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 ERICH3Q5RHP9 1530 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 BRAFP15056 766 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 ETV3P41162 512 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 BLMHQ13867 455 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 STARD3Q14849 445 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 SYCP1Q15431 976 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 ZNF174Q15697 407 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 TSTQ16762 297 aaKnown RBP4.33□□□□□ -1.72
SREK1-201ENST00000284041 TMTC4Q5T4D3 741 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 CWF19L1Q69YN2 538 aaKnown RBP4.33□□□□□ -1.72
SREK1-201ENST00000284041 LIPIQ6XZB0 460 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 SYNE3Q6ZMZ3 975 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 HEATR3Q7Z4Q2 680 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 ZNF713Q8N859 430 aaPredicted RBP4.33□□□□□ -1.72
SREK1-201ENST00000284041 PCYOX1LQ8NBM8 494 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 LILRB1Q8NHL6 650 aaPredicted RBP4.33□□□□□ -1.72
SREK1-201ENST00000284041 GAB3Q8WWW8 586 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 ZNF75CPQ92670 426 aaPredicted RBP4.33□□□□□ -1.72
SREK1-201ENST00000284041 HERC2P3Q9BVR0 1158 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 TLR8Q9NR97 1041 aaKnown RBP4.33□□□□□ -1.72
SREK1-201ENST00000284041 RASSF1Q9NS23 344 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 GTF3C4Q9UKN8 822 aa4.33□□□□□ -1.72
SREK1-201ENST00000284041 MAGED2Q9UNF1 606 aaPredicted RBP4.33□□□□□ -1.72
SREK1-201ENST00000284041 MIA2Q96PC5 1412 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 PRAMEF25A6NGN4 478 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 PCDH17O14917 1159 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 DNTTP04053 509 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 HOXD12P35452 270 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 TLE1Q04724 770 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 CSRP2Q16527 193 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 EMC4Q5J8M3 183 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 FASTKD5Q7L8L6 764 aaKnown RBP4.32□□□□□ -1.72
SREK1-201ENST00000284041 RSPH3Q86UC2 560 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 LCA5Q86VQ0 697 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 SYTL1Q8IYJ3 562 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 IQUBQ8NA54 791 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 TRIM54Q9BYV2 358 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 PITHD1Q9GZP4 211 aaPredicted RBP4.32□□□□□ -1.72
SREK1-201ENST00000284041 RNPEPQ9H4A4 650 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 TBC1D7Q9P0N9 293 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 IMPACTQ9P2X3 320 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 ASH2LQ9UBL3 628 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 NXF1Q9UBU9 619 aaKnown RBP4.32□□□□□ -1.72
SREK1-201ENST00000284041 AASSQ9UDR5 926 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 BAZ1AQ9NRL2 1556 aaPredicted RBP4.32□□□□□ -1.72
SREK1-201ENST00000284041 A0A0B4J203 849 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 APBB3O95704 486 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 TSPY4P0CV99 314 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 TSPY10P0CW01 314 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 GLB1P16278 677 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 RPL13P26373 211 aaKnown RBP4.32□□□□□ -1.72
SREK1-201ENST00000284041 KLRK1P26718 216 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 UBA7P41226 1012 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 FAPQ12884 760 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 TTC31Q49AM3 519 aaPredicted RBP4.32□□□□□ -1.72
SREK1-201ENST00000284041 DNAJC21Q5F1R6 531 aaKnown RBP4.32□□□□□ -1.72
SREK1-201ENST00000284041 SFRP5Q5T4F7 317 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 FIP1L1Q6UN15 594 aaKnown RBP4.32□□□□□ -1.72
SREK1-201ENST00000284041 CCDC129Q6ZRS4 1044 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 TMEM151BQ8IW70 566 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 Q8NA96 180 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.32□□□□□ -1.72
SREK1-201ENST00000284041 IPCEF1Q8WWN9 437 aaPredicted RBP4.32□□□□□ -1.72
SREK1-201ENST00000284041 ASB11Q8WXH4 323 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 TCHPQ9BT92 498 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 KATNAL1Q9BW62 490 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 SLC26A6Q9BXS9 759 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 MRPL46Q9H2W6 279 aaKnown RBP4.32□□□□□ -1.72
SREK1-201ENST00000284041 PRDM7Q9NQW5 492 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 DAPP1Q9UN19 280 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 GPR34Q9UPC5 381 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 NAALADL1Q9UQQ1 740 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 ATP23Q9Y6H3 246 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 RPAP1Q9BWH6 1393 aaPredicted RBP4.32□□□□□ -1.72
SREK1-201ENST00000284041 TNIKQ9UKE5 1360 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 PRAMEF22A3QJZ6 481 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 PGPEP1LA6NFU8 196 aa4.32□□□□□ -1.72
SREK1-201ENST00000284041 F2RL2O00254 374 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms