RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 PLCB1Q9NQ66 1216 aa18.49■□□□□ 0.55
SKP2-201ENST00000274254 NUB1Q9Y5A7 615 aa18.49■□□□□ 0.55
SKP2-201ENST00000274254 KPNA7A9QM74 516 aa18.49■□□□□ 0.55
SKP2-201ENST00000274254 WDR44Q5JSH3 913 aa18.49■□□□□ 0.55
SKP2-201ENST00000274254 SPOUT1Q5T280 376 aaKnown RBP18.49■□□□□ 0.55
SKP2-201ENST00000274254 TMEM173Q86WV6 379 aaPredicted RBP18.49■□□□□ 0.55
SKP2-201ENST00000274254 MRFAP1L1Q96HT8 127 aa18.49■□□□□ 0.55
SKP2-201ENST00000274254 FAXDC2Q96IV6 333 aa18.49■□□□□ 0.55
SKP2-201ENST00000274254 NT5C1BQ96P26 610 aa18.49■□□□□ 0.55
SKP2-201ENST00000274254 PBX4Q9BYU1 374 aa18.49■□□□□ 0.55
SKP2-201ENST00000274254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.49■□□□□ 0.55
SKP2-201ENST00000274254 GDAP2Q9NXN4 497 aa18.49■□□□□ 0.55
SKP2-201ENST00000274254 LINC01553A4QN01 128 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 NT5C1B-RDH14C9J2C7 533 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 ARHGEF15O94989 841 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 APBA1Q02410 837 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 WDR72Q3MJ13 1102 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 TIGD5Q53EQ6 642 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 ZNF667Q5HYK9 610 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 PHLDB3Q6NSJ2 640 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 SLC39A11Q8N1S5 342 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 HASPINQ8TF76 798 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 BCL7CQ8WUZ0 217 aaPredicted RBP18.48■□□□□ 0.55
SKP2-201ENST00000274254 TATDN2Q93075 761 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 LSM14BQ9BX40 385 aaKnown RBP18.48■□□□□ 0.55
SKP2-201ENST00000274254 AAASQ9NRG9 546 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 APEX2Q9UBZ4 518 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 ADAM28Q9UKQ2 775 aa18.48■□□□□ 0.55
SKP2-201ENST00000274254 YBX2Q9Y2T7 364 aaKnown RBP18.48■□□□□ 0.55
SKP2-201ENST00000274254 NOL4O94818 638 aa18.47■□□□□ 0.55
SKP2-201ENST00000274254 EFEMP2O95967 443 aa18.47■□□□□ 0.55
SKP2-201ENST00000274254 CA3P07451 260 aa18.47■□□□□ 0.55
SKP2-201ENST00000274254 PBX2P40425 430 aa18.47■□□□□ 0.55
SKP2-201ENST00000274254 LRMPQ12912 555 aa18.47■□□□□ 0.55
SKP2-201ENST00000274254 KLHDC7AQ5VTJ3 777 aa18.47■□□□□ 0.55
SKP2-201ENST00000274254 LIMS2Q7Z4I7 341 aa18.47■□□□□ 0.55
SKP2-201ENST00000274254 VSTM4Q8IW00 320 aa18.47■□□□□ 0.55
SKP2-201ENST00000274254 IGSF21Q96ID5 467 aa18.47■□□□□ 0.55
SKP2-201ENST00000274254 SUSD3Q96L08 255 aa18.47■□□□□ 0.55
SKP2-201ENST00000274254 NIF3L1Q9GZT8 377 aa18.47■□□□□ 0.55
SKP2-201ENST00000274254 GANQ9H2C0 597 aa18.47■□□□□ 0.55
SKP2-201ENST00000274254 FAM207AQ9NSI2 230 aaPredicted RBP18.47■□□□□ 0.55
SKP2-201ENST00000274254 SNX9Q9Y5X1 595 aa18.47■□□□□ 0.55
SKP2-201ENST00000274254 ITIH6Q6UXX5 1313 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 A0A1W2PPC1 479 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 M0QZQ0 153 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 EPHB6O15197 1021 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 TADA2AO75478 443 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 ADCY5O95622 1261 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 ASPAP45381 313 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 RAB30Q15771 203 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 ARHGEF19Q8IW93 802 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 BCO2Q9BYV7 579 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 SPG21Q9NZD8 308 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 NXF1Q9UBU9 619 aaKnown RBP18.46■□□□□ 0.55
SKP2-201ENST00000274254 FBXL5Q9UKA1 691 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 POLIQ9UNA4 740 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 PCDHB12Q9Y5F1 795 aa18.46■□□□□ 0.55
SKP2-201ENST00000274254 NLRC5Q86WI3 1866 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 P4HA1P13674 534 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 UCHL3P15374 230 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 RFX1P22670 979 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 PPM1AP35813 382 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 BMPR1AP36894 532 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 BRCC3P46736 316 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 TNNC1P63316 161 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 GCNT1Q02742 428 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 CUL2Q13617 745 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 GJB7Q6PEY0 223 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 RNF168Q8IYW5 571 aaPredicted RBP18.45■□□□□ 0.54
SKP2-201ENST00000274254 PPM1KQ8N3J5 372 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 SENP8Q96LD8 212 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 PCMTD1Q96MG8 357 aaPredicted RBP18.45■□□□□ 0.54
SKP2-201ENST00000274254 NAA15Q9BXJ9 866 aaKnown RBP18.45■□□□□ 0.54
SKP2-201ENST00000274254 GPR62Q9BZJ7 368 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 RWDD3Q9Y3V2 267 aa18.45■□□□□ 0.54
SKP2-201ENST00000274254 SF3B1O75533 1304 aaKnown RBP eCLIP18.45■□□□□ 0.541e-6■■■■■ 67.1
SKP2-201ENST00000274254 I3L4J1 428 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 CYB561D2O14569 222 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 TRAPPC3O43617 180 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 CLSTN1O94985 981 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 TBXAS1P24557 533 aaPredicted RBP18.44■□□□□ 0.54
SKP2-201ENST00000274254 SMAD3P84022 425 aaKnown RBP18.44■□□□□ 0.54
SKP2-201ENST00000274254 TAP1Q03518 808 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 SOWAHAQ2M3V2 549 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 FIGNQ5HY92 759 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 SPECC1LQ69YQ0 1117 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 FUT10Q6P4F1 479 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 RRAGAQ7L523 313 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 DPH6Q7L8W6 267 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 TOP6BLQ8N6T0 577 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 NEK11Q8NG66 645 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 FAM81BQ96LP2 452 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 KREMEN1Q96MU8 473 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 ARID3AQ99856 593 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 PLVAPQ9BX97 442 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 VN1R3Q9BXE9 311 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 TTYH3Q9C0H2 523 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 SMYD3Q9H7B4 428 aa18.44■□□□□ 0.54
SKP2-201ENST00000274254 UBE2TQ9NPD8 197 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms