RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 CCAR2Q8N163 923 aaKnown RBP24.32■■□□□ 1.48
UFD1-201ENST00000263202 EIF3CQ99613 913 aaKnown RBP24.32■■□□□ 1.48
UFD1-201ENST00000263202 BCO2Q9BYV7 579 aa24.32■■□□□ 1.48
UFD1-201ENST00000263202 SPTLC3Q9NUV7 552 aa24.32■■□□□ 1.48
UFD1-201ENST00000263202 CYP26A1O43174 497 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 LRPAP1P30533 357 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 MYO1EQ12965 1108 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 SCARA5Q6ZMJ2 495 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 DEFB128Q7Z7B8 93 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 ACRBPQ8NEB7 543 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 CNTN6Q9UQ52 1028 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 PPP2R2CQ9Y2T4 447 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 TRIM43BA6NCK2 446 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 USP27XA6NNY8 438 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 KIAA0355O15063 1070 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 INPPL1O15357 1258 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 AKR1B10O60218 316 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 OFD1O75665 1012 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 KRT5P13647 590 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 TRIM43Q96BQ3 446 aaPredicted RBP24.31■■□□□ 1.48
UFD1-201ENST00000263202 SYT11Q9BT88 431 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 TRMT1Q9NXH9 659 aaKnown RBP24.31■■□□□ 1.48
UFD1-201ENST00000263202 REXO2Q9Y3B8 237 aaKnown RBP24.31■■□□□ 1.48
UFD1-201ENST00000263202 PCDHB4Q9Y5E5 795 aa24.31■■□□□ 1.48
UFD1-201ENST00000263202 LCA5LO95447 670 aa24.3■■□□□ 1.48
UFD1-201ENST00000263202 VWCEQ96DN2 955 aa24.3■■□□□ 1.48
UFD1-201ENST00000263202 ELAC1Q9H777 363 aaKnown RBP24.3■■□□□ 1.48
UFD1-201ENST00000263202 PRDM5Q9NQX1 630 aaPredicted RBP24.3■■□□□ 1.48
UFD1-201ENST00000263202 CISHQ9NSE2 258 aa24.3■■□□□ 1.48
UFD1-201ENST00000263202 TMEM161AQ9NX61 479 aa24.3■■□□□ 1.48
UFD1-201ENST00000263202 ZNF263O14978 683 aa24.29■■□□□ 1.48
UFD1-201ENST00000263202 ZNF500O60304 480 aaPredicted RBP24.29■■□□□ 1.48
UFD1-201ENST00000263202 TIMP1P01033 207 aa24.29■■□□□ 1.48
UFD1-201ENST00000263202 WEE2P0C1S8 567 aa24.29■■□□□ 1.48
UFD1-201ENST00000263202 CCDC175P0C221 793 aa24.29■■□□□ 1.48
UFD1-201ENST00000263202 P4HA1P13674 534 aa24.29■■□□□ 1.48
UFD1-201ENST00000263202 ITGB8P26012 769 aa24.29■■□□□ 1.48
UFD1-201ENST00000263202 RFC2P35250 354 aa24.29■■□□□ 1.48
UFD1-201ENST00000263202 SLC47A2Q86VL8 602 aa24.29■■□□□ 1.48
UFD1-201ENST00000263202 OLIG1Q8TAK6 271 aa24.29■■□□□ 1.48
UFD1-201ENST00000263202 SDCBP2Q9H190 292 aa24.29■■□□□ 1.48
UFD1-201ENST00000263202 ACP6Q9NPH0 428 aa24.29■■□□□ 1.48
UFD1-201ENST00000263202 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.29■■□□□ 1.48
UFD1-201ENST00000263202 TTC3P53804 2025 aa24.29■■□□□ 1.48
UFD1-201ENST00000263202 POMCP01189 267 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 GFPT1Q06210 699 aaPredicted RBP24.28■■□□□ 1.48
UFD1-201ENST00000263202 SMYD5Q6GMV2 418 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 TMEM270Q6UE05 265 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 EPS8L1Q8TE68 723 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.28■■□□□ 1.48
UFD1-201ENST00000263202 SMYD3Q9H7B4 428 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 ADAMTS1Q9UHI8 967 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 INPP5FQ9Y2H2 1132 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 LTBP2Q14767 1821 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 A0A087X0T9 212 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.28■■□□□ 1.48
UFD1-201ENST00000263202 ZSCAN12O43309 604 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 FAM228BP0C875 321 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 CD58P19256 250 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 ANXA13P27216 316 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 RAP1GAPP47736 663 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 TNNC1P63316 161 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 GRIK3Q13003 919 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 SLC18A3Q16572 532 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 CLLU1OSQ5K130 101 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 GLB1LQ6UWU2 654 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 NOP9Q86U38 636 aaKnown RBP24.28■■□□□ 1.48
UFD1-201ENST00000263202 REXO1L1PQ8IX06 675 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 ZNF560Q96MR9 790 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 CYP3A43Q9HB55 503 aa24.28■■□□□ 1.48
UFD1-201ENST00000263202 NOCTQ9UK39 431 aaKnown RBP24.28■■□□□ 1.48
UFD1-201ENST00000263202 FGFR1P11362 822 aa24.27■■□□□ 1.48
UFD1-201ENST00000263202 CYP11B1P15538 503 aa24.27■■□□□ 1.48
UFD1-201ENST00000263202 PNPLA4P41247 253 aa24.27■■□□□ 1.48
UFD1-201ENST00000263202 CDH8P55286 799 aa24.27■■□□□ 1.48
UFD1-201ENST00000263202 YWHAEP62258 255 aaKnown RBP24.27■■□□□ 1.48
UFD1-201ENST00000263202 CYP27A1Q02318 531 aa24.27■■□□□ 1.48
UFD1-201ENST00000263202 CNKSR3Q6P9H4 555 aa24.27■■□□□ 1.48
UFD1-201ENST00000263202 RBBP8NLQ8NC74 664 aaPredicted RBP24.27■■□□□ 1.48
UFD1-201ENST00000263202 SLC20A1Q8WUM9 679 aa24.27■■□□□ 1.48
UFD1-201ENST00000263202 PPP1R13BQ96KQ4 1090 aa24.27■■□□□ 1.48
UFD1-201ENST00000263202 AGPAT1Q99943 283 aa24.27■■□□□ 1.48
UFD1-201ENST00000263202 CACNG4Q9UBN1 327 aa24.27■■□□□ 1.48
UFD1-201ENST00000263202 SPTLC1O15269 473 aa24.26■■□□□ 1.47
UFD1-201ENST00000263202 CCP110O43303 1012 aa24.26■■□□□ 1.47
UFD1-201ENST00000263202 TAF6P49848 677 aa24.26■■□□□ 1.47
UFD1-201ENST00000263202 ZNF132P52740 706 aa24.26■■□□□ 1.47
UFD1-201ENST00000263202 KRT83P78385 493 aa24.26■■□□□ 1.47
UFD1-201ENST00000263202 BMS1Q14692 1282 aaKnown RBP24.26■■□□□ 1.47
UFD1-201ENST00000263202 VPS36Q86VN1 386 aa24.26■■□□□ 1.47
UFD1-201ENST00000263202 LNX1Q8TBB1 728 aaPredicted RBP24.26■■□□□ 1.47
UFD1-201ENST00000263202 PCDHB7Q9Y5E2 793 aa24.26■■□□□ 1.47
UFD1-201ENST00000263202 DDX3XO00571 662 aaKnown RBP eCLIP24.26■■□□□ 1.478e-13■■□□□ 11.7
UFD1-201ENST00000263202 IPO7O95373 1038 aaKnown RBP24.26■■□□□ 1.47
UFD1-201ENST00000263202 RAG1P15918 1043 aa24.26■■□□□ 1.47
UFD1-201ENST00000263202 PDE6CP51160 858 aa24.26■■□□□ 1.47
UFD1-201ENST00000263202 SPA17Q15506 151 aa24.26■■□□□ 1.47
UFD1-201ENST00000263202 CRIPAKQ8N1N5 446 aa24.26■■□□□ 1.47
UFD1-201ENST00000263202 SLC30A5Q8TAD4 765 aa24.26■■□□□ 1.47
UFD1-201ENST00000263202 MMS19Q96T76 1030 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms