RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 PROSCO94903 275 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 NPTX2P47972 431 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 HGSNATQ68CP4 663 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 SLC51AQ86UW1 340 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 FUKQ8N0W3 1084 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 SLC26A7Q8TE54 656 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 SCFD2Q8WU76 684 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 CCDC97Q96F63 343 aaPredicted RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 FGD4Q96M96 766 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 NAALADL1Q9UQQ1 740 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 FAM86B1E9PN63 330 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 FAM86B2P0C5J1 330 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 COG7P83436 770 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 BIRC2Q13490 618 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 RCN1Q15293 331 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 SERPINB12Q96P63 405 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 TRIM33Q9UPN9 1127 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 FSBPO95073 299 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 RRP1BQ14684 758 aaKnown RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 C1orf146Q5VVC0 180 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 BTNL9Q6UXG8 535 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 RGS9BPQ6ZS82 235 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 CCNYL1Q8N7R7 359 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 NLRP7Q8WX94 980 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 DNAJC9Q8WXX5 260 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 FOXP3Q9BZS1 431 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 C10orf88Q9H8K7 445 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 TLK1Q9UKI8 766 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 CROCCQ5TZA2 2017 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 CPNE8Q86YQ8 564 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 THTPAQ9BU02 230 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 CHST7Q9NS84 486 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 SETD1AO15047 1707 aaKnown RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 MYO7AQ13402 2215 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 PDGFRAP16234 1089 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 FECHP22830 423 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 FNTAP49354 379 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 TFDP1Q14186 410 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 STXBP2Q15833 593 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 KLHL38Q2WGJ6 581 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 NLRP9Q7RTR0 991 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 CNPY4Q8N129 248 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 MREGQ8N565 214 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 RIT2Q99578 217 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 MRPL4Q9BYD3 311 aaKnown RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 KLC2Q9H0B6 622 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 ZC3H7BQ9UGR2 993 aaKnown RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 NUP205Q92621 2012 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 NINQ8N4C6 2090 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 NFIBO00712 420 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 CASQ2O14958 399 aaPredicted RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 CHKAP35790 457 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 STRIP1Q5VSL9 837 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 OR6B3Q8NGW1 331 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 ATG4CQ96DT6 458 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 KCTD10Q9H3F6 313 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 ERVK-5Q9HDB9 667 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 KCNQ5Q9NR82 932 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 ANKEF1Q9NU02 776 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 ZNF70Q9UC06 446 aaPredicted RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 SMG5Q9UPR3 1016 aaKnown RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 DCDC2CA8MYV0 355 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 NVLO15381 856 aaKnown RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 P4HA2O15460 535 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 SPATA31C1P0DKV0 1188 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 YY1P25490 414 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 KLC1Q07866 573 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 PTK7Q13308 1070 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 DAB2IPQ5VWQ8 1189 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 CDR2LQ86X02 465 aaPredicted RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 C1orf131Q8NDD1 294 aaKnown RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 UBA3Q8TBC4 463 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 HDAC11Q96DB2 347 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 MXRA8Q9BRK3 442 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 GEMIN8Q9NWZ8 242 aaKnown RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 M0QYV0 167 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 OPLAHO14841 1288 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 ZSCAN5DPP0CG00 497 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 SLC1A1P43005 524 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 ASPHQ12797 758 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 PPWD1Q96BP3 646 aaKnown RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 PWWP2AQ96N64 755 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 TRIM56Q9BRZ2 755 aaKnown RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 TSSK1BQ9BXA7 367 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 AGO4Q9HCK5 861 aaKnown RBP4.86□□□□□ -1.63
VPS13C-201ENST00000249837 DLGAP2Q9P1A6 1054 aa4.86□□□□□ -1.63
VPS13C-201ENST00000249837 KCNN4O15554 427 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 ASAP2O43150 1006 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 ATP6V1G2O95670 118 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 KRT4P19013 534 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 CUL3Q13618 768 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 C11orf63Q6NUN7 778 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 LRRC15Q8TF66 581 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 ZKSCAN4Q969J2 545 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-201ENST00000249837 MAGEB18Q96M61 343 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 KCNH7Q9NS40 1196 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 HERC5Q9UII4 1024 aaKnown RBP4.85□□□□□ -1.63
VPS13C-201ENST00000249837 APOBEC2Q9Y235 224 aaKnown RBP4.85□□□□□ -1.63
VPS13C-201ENST00000249837 MRC1P22897 1456 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 KRT37O76014 449 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms