RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 THAP12O43422 761 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 H2AFXP16104 143 aaPredicted RBP15.9■□□□□ 0.14
CCDC47-201ENST00000225726 CST5P28325 142 aaPredicted RBP15.9■□□□□ 0.14
CCDC47-201ENST00000225726 PAFAH1B1P43034 410 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 YARSP54577 528 aaKnown RBP15.9■□□□□ 0.14
CCDC47-201ENST00000225726 C11orf63Q6NUN7 778 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 SCARA5Q6ZMJ2 495 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 MTERF4Q7Z6M4 381 aaKnown RBP15.9■□□□□ 0.14
CCDC47-201ENST00000225726 PDCL2Q8N4E4 241 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 KLHDC9Q8NEP7 349 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 CD99L2Q8TCZ2 262 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 KIF12Q96FN5 646 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 CELF4Q9BZC1 486 aaKnown RBP15.9■□□□□ 0.14
CCDC47-201ENST00000225726 GOLPH3Q9H4A6 298 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 POLIQ9UNA4 740 aa15.9■□□□□ 0.14
CCDC47-201ENST00000225726 PIN4Q9Y237 131 aaKnown RBP15.9■□□□□ 0.14
CCDC47-201ENST00000225726 FAM170AA1A519 330 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 STAU1O95793 577 aaKnown RBP15.89■□□□□ 0.13
CCDC47-201ENST00000225726 HMGCRP04035 888 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 MYBL1P10243 752 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 CD58P19256 250 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 MRPS6P82932 125 aaKnown RBP15.89■□□□□ 0.13
CCDC47-201ENST00000225726 CENPCQ03188 943 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 PBKQ96KB5 322 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 DPP3Q9NY33 737 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 UVRAGQ9P2Y5 699 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 THSD7BQ9C0I4 1608 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 TRPA1O75762 1119 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 RBP5P82980 135 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 CFAP221Q4G0U5 840 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 GDF6Q6KF10 455 aaPredicted RBP15.89■□□□□ 0.13
CCDC47-201ENST00000225726 RSPH3Q86UC2 560 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 SESTD1Q86VW0 696 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 NOA1Q8NC60 698 aaKnown RBP15.89■□□□□ 0.13
CCDC47-201ENST00000225726 TRIM6Q9C030 488 aaPredicted RBP15.89■□□□□ 0.13
CCDC47-201ENST00000225726 NXF1Q9UBU9 619 aaKnown RBP15.89■□□□□ 0.13
CCDC47-201ENST00000225726 M0QZ92 97 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 RPLP2P05387 115 aaKnown RBP15.89■□□□□ 0.13
CCDC47-201ENST00000225726 P4HA1P13674 534 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 POLR2BP30876 1174 aaKnown RBP15.89■□□□□ 0.13
CCDC47-201ENST00000225726 FBXO38Q6PIJ6 1188 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 MCOLN2Q8IZK6 566 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 MSANTD4Q8NCY6 345 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 HES6Q96HZ4 224 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 TRPV2Q9Y5S1 764 aa15.89■□□□□ 0.13
CCDC47-201ENST00000225726 WEE2P0C1S8 567 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 MAP2K2P36507 400 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 NUP85Q9BW27 656 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 ANKZF1Q9H8Y5 726 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 CYP3A43Q9HB55 503 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 AVENQ9NQS1 362 aaPredicted RBP15.88■□□□□ 0.13
CCDC47-201ENST00000225726 ARGLU1Q9NWB6 273 aaPredicted RBP15.88■□□□□ 0.13
CCDC47-201ENST00000225726 AGAP1Q9UPQ3 857 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 NSFP46459 744 aaKnown RBP15.88■□□□□ 0.13
CCDC47-201ENST00000225726 NOMO3P69849 1222 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 KCNA10Q16322 511 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 MAP3K21Q5TCX8 1036 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 NAA35Q5VZE5 725 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 CCSAPQ6IQ19 270 aaPredicted RBP15.88■□□□□ 0.13
CCDC47-201ENST00000225726 CYFIP2Q96F07 1278 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 EPC1Q9H2F5 836 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 CNTN3Q9P232 1028 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 PDCD11Q14690 1871 aaKnown RBP15.88■□□□□ 0.13
CCDC47-201ENST00000225726 KCNK3O14649 394 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 ATMINO43313 823 aaPredicted RBP15.88■□□□□ 0.13
CCDC47-201ENST00000225726 GNRH1P01148 92 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 ASGR1P07306 291 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 DNA2P51530 1060 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 WDR72Q3MJ13 1102 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 ZNF564Q8TBZ8 553 aaPredicted RBP15.88■□□□□ 0.13
CCDC47-201ENST00000225726 ZNF606Q8WXB4 792 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 CPA5Q8WXQ8 436 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 HPDLQ96IR7 371 aa15.88■□□□□ 0.13
CCDC47-201ENST00000225726 CNOT8Q9UFF9 292 aaKnown RBP15.88■□□□□ 0.13
CCDC47-201ENST00000225726 FAM47CQ5HY64 1035 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 UBXN11Q5T124 520 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 ALKAL1Q6UXT8 129 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 SERINC5Q86VE9 423 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 TMEM130Q8N3G9 435 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 MMGT1Q8N4V1 131 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 PCSK9Q8NBP7 692 aaKnown RBP15.87■□□□□ 0.13
CCDC47-201ENST00000225726 TSPAN18Q96SJ8 248 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 SELENOOQ9BVL4 669 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 PARD6BQ9BYG5 372 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 NXF3Q9H4D5 531 aaKnown RBP15.87■□□□□ 0.13
CCDC47-201ENST00000225726 FAM124BQ9H5Z6 455 aaPredicted RBP15.87■□□□□ 0.13
CCDC47-201ENST00000225726 CDY2AQ9Y6F7 541 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 GUCY2FP51841 1108 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 MON1BQ7L1V2 547 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 RPAINQ86UA6 219 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 FAM228AQ86W67 206 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 LSM8O95777 96 aaKnown RBP15.87■□□□□ 0.13
CCDC47-201ENST00000225726 CFHP08603 1231 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 C2orf54Q08AI8 447 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 PHF13Q86YI8 300 aaPredicted RBP15.87■□□□□ 0.13
CCDC47-201ENST00000225726 SPATA4Q8NEY3 305 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 BEST2Q8NFU1 509 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 MS4A14Q96JA4 679 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 VCPIP1Q96JH7 1222 aa15.87■□□□□ 0.13
CCDC47-201ENST00000225726 DDX20Q9UHI6 824 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms