RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 FAM71AQ8IYT1 594 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 SPIRE2Q8WWL2 714 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 FAF2Q96CS3 445 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 MED10Q9BTT4 135 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 SIX2Q9NPC8 291 aa13.07□□□□□ -0.32
TM9SF4-201ENST00000217315 CDH6P55285 790 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 SYDE1Q6ZW31 735 aaPredicted RBP13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 C4orf33Q8N1A6 199 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 PRELID2Q8N945 189 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 CCNYQ8ND76 341 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 SHC3Q92529 594 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 MMP19Q99542 508 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 NR2E1Q9Y466 385 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 GOLGA8RI6L899 631 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 CSDE1O75534 798 aaKnown RBP13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 GRAP2O75791 330 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 CCNE2O96020 404 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 PGK2P07205 417 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 SLC8A1P32418 973 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 DSG3P32926 999 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 PCK1P35558 622 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 RFC5P40937 340 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 HSD17B4P51659 736 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 IFI35P80217 286 aaPredicted RBP13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 SKOR1P84550 965 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 STAT4Q14765 748 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 CCDC14Q49A88 953 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 ZSWIM2Q8NEG5 633 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 SEMA4DQ92854 862 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 AGAP1Q9UPQ3 857 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 RIPK3Q9Y572 518 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 PCDHA3Q9Y5H8 950 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 TBC1D12O60347 775 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 ZC3H11AO75152 810 aaKnown RBP eCLIP13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 MAGEA4P43358 317 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 NOVP48745 357 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 MYL6P60660 151 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 SARNPP82979 210 aaKnown RBP13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 FMO1Q01740 532 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 PPATQ06203 517 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 HIF1AQ16665 826 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 DAB2IPQ5VWQ8 1189 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 LRRC34Q8IZ02 419 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 MREGQ8N565 214 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 CHST13Q8NET6 341 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 SLC10A4Q96EP9 437 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 KREMEN1Q96MU8 473 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 TTC25Q96NG3 672 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 EFCC1Q9HA90 598 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 ASNSD1Q9NWL6 643 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 CACNA1SQ13698 1873 aa13.06□□□□□ -0.32
TM9SF4-201ENST00000217315 CST8O60676 142 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 PROSCO94903 275 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 CPP00450 1065 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 JAM2P57087 298 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 GCNT1Q02742 428 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 KCNT1Q5JUK3 1230 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 ATF7IP2Q5U623 682 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 DAW1Q8N136 415 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 SLC16A10Q8TF71 515 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 TTC17Q96AE7 1141 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 ERVK-5Q9HDB9 667 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 CHST7Q9NS84 486 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 HAUS2Q9NVX0 235 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 A0A1B0GUA9 196 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 OPLAHO14841 1288 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 PTGER2P43116 358 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 RGS7P49802 495 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 MMP14P50281 582 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 TFDP2Q14188 446 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 FAM47CQ5HY64 1035 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 SAMD3Q8N6K7 520 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 PCDHB18PQ96TA0 734 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 MAGED2Q9UNF1 606 aaPredicted RBP13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 CCDC88AQ3V6T2 1871 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 SHBGP04278 402 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 CLCN3P51790 818 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 IRX4P78413 519 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 R3HDM1Q15032 1099 aaKnown RBP13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 IER5Q5VY09 327 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 C1orf228Q6PIY5 440 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 DDX23Q9BUQ8 820 aaKnown RBP13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 DDX56Q9NY93 547 aaKnown RBP13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 DCTN4Q9UJW0 460 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 NCANO14594 1321 aa13.05□□□□□ -0.32
TM9SF4-201ENST00000217315 OGTO15294 1046 aa13.04□□□□□ -0.32
TM9SF4-201ENST00000217315 TOM1L1O75674 476 aa13.04□□□□□ -0.32
TM9SF4-201ENST00000217315 EIF3EP60228 445 aaKnown RBP13.04□□□□□ -0.32
TM9SF4-201ENST00000217315 PIGHQ14442 188 aaPredicted RBP13.04□□□□□ -0.32
TM9SF4-201ENST00000217315 EFCAB12Q6NXP0 572 aa13.04□□□□□ -0.32
TM9SF4-201ENST00000217315 ZNF606Q8WXB4 792 aa13.04□□□□□ -0.32
TM9SF4-201ENST00000217315 ATP2A3Q93084 1043 aa13.04□□□□□ -0.32
TM9SF4-201ENST00000217315 RAB3IPQ96QF0 476 aaPredicted RBP13.04□□□□□ -0.32
TM9SF4-201ENST00000217315 ROPN1BQ9BZX4 212 aaPredicted RBP13.04□□□□□ -0.32
TM9SF4-201ENST00000217315 SNX25Q9H3E2 840 aa13.04□□□□□ -0.32
TM9SF4-201ENST00000217315 ROPN1Q9HAT0 212 aaPredicted RBP13.04□□□□□ -0.32
TM9SF4-201ENST00000217315 ALG13Q9NP73 1137 aaKnown RBP13.04□□□□□ -0.32
TM9SF4-201ENST00000217315 KLC4Q9NSK0 619 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms