RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 DMP1Q13316 513 aaPredicted RBP12.14□□□□□ -0.47
CDKL1-201ENST00000216378 EXOC3L4Q17RC7 722 aa12.14□□□□□ -0.47
CDKL1-201ENST00000216378 LMBRD2Q68DH5 695 aaPredicted RBP12.14□□□□□ -0.47
CDKL1-201ENST00000216378 PPP4R3CPQ6ZMV5 832 aa12.14□□□□□ -0.47
CDKL1-201ENST00000216378 FRMD5Q7Z6J6 570 aa12.14□□□□□ -0.47
CDKL1-201ENST00000216378 ZNF410Q86VK4 478 aa12.14□□□□□ -0.47
CDKL1-201ENST00000216378 RBM12BQ8IXT5 1001 aaKnown RBP12.14□□□□□ -0.47
CDKL1-201ENST00000216378 CCDC127Q96BQ5 260 aa12.14□□□□□ -0.47
CDKL1-201ENST00000216378 SIX2Q9NPC8 291 aa12.14□□□□□ -0.47
CDKL1-201ENST00000216378 LARSQ9P2J5 1176 aaKnown RBP12.14□□□□□ -0.47
CDKL1-201ENST00000216378 CACNG4Q9UBN1 327 aa12.14□□□□□ -0.47
CDKL1-201ENST00000216378 NUB1Q9Y5A7 615 aa12.14□□□□□ -0.47
CDKL1-201ENST00000216378 MYO7AQ13402 2215 aa12.14□□□□□ -0.47
CDKL1-201ENST00000216378 ANKRD65E5RJM6 399 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 EIF3DO15371 548 aaKnown RBP eCLIP12.13□□□□□ -0.47
CDKL1-201ENST00000216378 MOCS3O95396 460 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 GNA14O95837 355 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 CALCAP01258 141 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 ATP1A1P05023 1023 aaKnown RBP12.13□□□□□ -0.47
CDKL1-201ENST00000216378 ADRB2P07550 413 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 IGFBP6P24592 240 aaPredicted RBP12.13□□□□□ -0.47
CDKL1-201ENST00000216378 RPL13P26373 211 aaKnown RBP12.13□□□□□ -0.47
CDKL1-201ENST00000216378 ADSSP30520 456 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 PSMC2P35998 433 aaKnown RBP12.13□□□□□ -0.47
CDKL1-201ENST00000216378 RAB27AP51159 221 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 NCKAP1LP55160 1127 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 PPIGQ13427 754 aaKnown RBP eCLIP12.13□□□□□ -0.47
CDKL1-201ENST00000216378 ARHGAP44Q17R89 818 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 RASIP1Q5U651 963 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 SFMBT2Q5VUG0 894 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 SCARA3Q6AZY7 606 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 HS2ST1Q7LGA3 356 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 CBWD2Q8IUF1 395 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 RNF169Q8NCN4 708 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 CAPZA3Q96KX2 299 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 NTPCRQ9BSD7 190 aaKnown RBP12.13□□□□□ -0.47
CDKL1-201ENST00000216378 STRA6Q9BX79 667 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 NXF3Q9H4D5 531 aaKnown RBP12.13□□□□□ -0.47
CDKL1-201ENST00000216378 LMCD1Q9NZU5 365 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 PPME1Q9Y570 386 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 COL4A6Q14031 1691 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 TTC3P53804 2025 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 A0A1W2PQJ5 194 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 ABLIM1O14639 778 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 ZNF185O15231 689 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 NCK2O43639 380 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 GAS2O43903 313 aaKnown RBP12.13□□□□□ -0.47
CDKL1-201ENST00000216378 PRKCBP05771 671 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 UCHL3P15374 230 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 PHKA2P46019 1235 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 MARSP56192 900 aaKnown RBP12.13□□□□□ -0.47
CDKL1-201ENST00000216378 OSTNP61366 133 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 PPP3CAQ08209 521 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 IQCEQ6IPM2 695 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 CNKSR3Q6P9H4 555 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 ZBTB33Q86T24 672 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 IFNLR1Q8IU57 520 aaPredicted RBP12.13□□□□□ -0.47
CDKL1-201ENST00000216378 KAT5Q92993 513 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 RNPC3Q96LT9 517 aaKnown RBP12.13□□□□□ -0.47
CDKL1-201ENST00000216378 PDZD7Q9H5P4 517 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 HAUS4Q9H6D7 363 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 SMARCAL1Q9NZC9 954 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 ADAMTS1Q9UHI8 967 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 FRMD4BQ9Y2L6 1034 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 PCDHA13Q9Y5I0 950 aa12.13□□□□□ -0.47
CDKL1-201ENST00000216378 A0A087X0T9 212 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 K7ERI5 159 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 B4GALT3O60512 393 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 GFPT2O94808 682 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 FAM228BP0C875 321 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 HARSP12081 509 aaKnown RBP12.12□□□□□ -0.47
CDKL1-201ENST00000216378 AKAP5P24588 427 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 CYLC1P35663 651 aaPredicted RBP12.12□□□□□ -0.47
CDKL1-201ENST00000216378 KLHDC7AQ5VTJ3 777 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 SMG8Q8ND04 991 aaKnown RBP12.12□□□□□ -0.47
CDKL1-201ENST00000216378 PARD3BQ8TEW8 1205 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 HERVK_113Q902F9 699 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 SEPT8Q92599 483 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 IFT74Q96LB3 600 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 SPAG5Q96R06 1193 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 APOL6Q9BWW8 343 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
CDKL1-201ENST00000216378 GOLPH3Q9H4A6 298 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 ACP6Q9NPH0 428 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 HSPBP1Q9NZL4 362 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 KCND2Q9NZV8 630 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 CEP72Q9P209 647 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 MRFAP1Q9Y605 127 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 CAPN6Q9Y6Q1 641 aa12.12□□□□□ -0.47
CDKL1-201ENST00000216378 C9IYK1 514 aa12.11□□□□□ -0.47
CDKL1-201ENST00000216378 ASAP2O43150 1006 aa12.11□□□□□ -0.47
CDKL1-201ENST00000216378 FMO5P49326 533 aa12.11□□□□□ -0.47
CDKL1-201ENST00000216378 WNT7BP56706 349 aa12.11□□□□□ -0.47
CDKL1-201ENST00000216378 MRPS25P82663 173 aaKnown RBP12.11□□□□□ -0.47
CDKL1-201ENST00000216378 PTK2Q05397 1052 aa12.11□□□□□ -0.47
CDKL1-201ENST00000216378 PPP2R3AQ06190 1150 aa12.11□□□□□ -0.47
CDKL1-201ENST00000216378 FIGNQ5HY92 759 aa12.11□□□□□ -0.47
CDKL1-201ENST00000216378 WLSQ5T9L3 541 aa12.11□□□□□ -0.47
CDKL1-201ENST00000216378 ARMC3Q5W041 872 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms