RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZNF677Q86XU0 584 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 CISHQ9NSE2 258 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 DPP3Q9NY33 737 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ITGA11Q9UKX5 1188 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 SAR1BQ9Y6B6 198 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 PTCH2Q9Y6C5 1203 aa21.05■□□□□ 0.96
TNFRSF1A-201ENST00000162749 GRID2IPA4D2P6 1211 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 NCANO14594 1321 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 WEE2P0C1S8 567 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 CD58P19256 250 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 AKAP5P24588 427 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 POLR2BP30876 1174 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 MGAT3Q09327 533 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 WHAMMP3Q1A5X7 153 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 CC2D1AQ6P1N0 951 aaPredicted RBP21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 RFFLQ8WZ73 363 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 VRTNQ9H8Y1 702 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ANKZF1Q9H8Y5 726 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 NXF1Q9UBU9 619 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 TRIM17Q9Y577 477 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 MOXD2PA6NHM9 499 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 RPS6KA5O75582 802 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 GNA15P30679 374 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 NOP2P46087 812 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ZNF667Q5HYK9 610 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ARHGEF26Q96DR7 871 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 APOL6Q9BWW8 343 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 TRMT13Q9NUP7 481 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 CNTN3Q9P232 1028 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 POLIQ9UNA4 740 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 DERAQ9Y315 318 aa21.04■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ATICP31939 592 aa21.03■□□□□ 0.96
TNFRSF1A-201ENST00000162749 THPOP40225 353 aa21.03■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ZBTB6Q15916 424 aa21.03■□□□□ 0.96
TNFRSF1A-201ENST00000162749 TWF2Q6IBS0 349 aaKnown RBP21.03■□□□□ 0.96
TNFRSF1A-201ENST00000162749 SLC35G2Q8TBE7 412 aa21.03■□□□□ 0.96
TNFRSF1A-201ENST00000162749 GLT1D1Q96MS3 346 aa21.03■□□□□ 0.96
TNFRSF1A-201ENST00000162749 BCO2Q9BYV7 579 aa21.03■□□□□ 0.96
TNFRSF1A-201ENST00000162749 OSGEPQ9NPF4 335 aa21.03■□□□□ 0.96
TNFRSF1A-201ENST00000162749 ST3GAL5Q9UNP4 418 aa21.03■□□□□ 0.96
TNFRSF1A-201ENST00000162749 IPPQ9Y573 584 aa21.03■□□□□ 0.96
TNFRSF1A-201ENST00000162749 IFI16Q16666 785 aaKnown RBP21.02■□□□□ 0.96
TNFRSF1A-201ENST00000162749 GLRA4Q5JXX5 417 aa21.02■□□□□ 0.96
TNFRSF1A-201ENST00000162749 LRRC57Q8N9N7 239 aa21.02■□□□□ 0.96
TNFRSF1A-201ENST00000162749 SMG8Q8ND04 991 aaKnown RBP21.02■□□□□ 0.96
TNFRSF1A-201ENST00000162749 TPCN2Q8NHX9 752 aa21.02■□□□□ 0.96
TNFRSF1A-201ENST00000162749 FAXDC2Q96IV6 333 aa21.02■□□□□ 0.96
TNFRSF1A-201ENST00000162749 TLR10Q9BXR5 811 aa21.02■□□□□ 0.96
TNFRSF1A-201ENST00000162749 RNF39Q9H2S5 420 aa21.02■□□□□ 0.96
TNFRSF1A-201ENST00000162749 AGAP1Q9UPQ3 857 aa21.02■□□□□ 0.96
TNFRSF1A-201ENST00000162749 SRGAP2O75044 1071 aa21.02■□□□□ 0.96
TNFRSF1A-201ENST00000162749 HPDLQ96IR7 371 aa21.02■□□□□ 0.96
TNFRSF1A-201ENST00000162749 GOLPH3Q9H4A6 298 aa21.02■□□□□ 0.96
TNFRSF1A-201ENST00000162749 SNX12Q9UMY4 172 aa21.02■□□□□ 0.96
TNFRSF1A-201ENST00000162749 UNGP13051 313 aaPredicted RBP21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 PLA2G4AP47712 749 aa21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 NFX1Q12986 1120 aaKnown RBP21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CLEC16AQ2KHT3 1053 aa21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 TSEN34Q9BSV6 310 aaKnown RBP21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 TUBGCP4Q9UGJ1 667 aa21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 NCK2O43639 380 aa21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 FTCDO95954 541 aa21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 RAP1GAPP47736 663 aa21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 RBP5P82980 135 aa21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 PTPN11Q06124 597 aaPredicted RBP21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ZNF394Q53GI3 561 aa21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 MSANTD4Q8NCY6 345 aa21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 SH3TC2Q8TF17 1288 aa21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 OSBPL7Q9BZF2 842 aa21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 AGO3Q9H9G7 860 aaKnown RBP21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 PRDM4Q9UKN5 801 aa21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 NOD1Q9Y239 953 aa21.01■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CTAGE15A4D2H0 777 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 SASH3O75995 380 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CFHP08603 1231 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CTAGE8P0CG41 777 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 PTK7Q13308 1070 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CTAGE6Q86UF2 777 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CTAGE4Q8IX94 777 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 PNKPQ96T60 521 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 RNF19AQ9NV58 838 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 KLK14Q9P0G3 267 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 COG5Q9UP83 839 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 A0A1W2PQ45 241 aaPredicted RBP21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 A0A1W2PQY0 241 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 THAP12O43422 761 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 STAU1O95793 577 aaKnown RBP21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CYP1A1P04798 512 aaPredicted RBP21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 GPC5P78333 572 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 XKR4Q5GH76 650 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 MEI1Q5TIA1 1274 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ACAD10Q6JQN1 1059 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ARRDC4Q8NCT1 418 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ZNF606Q8WXB4 792 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 C18orf25Q96B23 403 aaPredicted RBP21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 SDCBP2Q9H190 292 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 SMYD3Q9H7B4 428 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ST7Q9NRC1 585 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 PARP2Q9UGN5 583 aa21■□□□□ 0.95
TNFRSF1A-201ENST00000162749 MKI67P46013 3256 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms