RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 A0A1W2PPM1 405 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 GOLGA8SH3BPF8 625 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 GOLGA8MH3BSY2 632 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 CBX6O95503 412 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 PECAM1P16284 738 aaPredicted RBP21.47■■□□□ 1.03
RCN1-201ENST00000054950 KRT15P19012 456 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 RHOT1Q8IXI2 618 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 BICD1Q96G01 975 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 IWS1Q96ST2 819 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 TCEAL9Q9UHQ7 104 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 PTPRJQ12913 1337 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 GM2AP17900 193 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 SP4Q02446 784 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 MAMLD1Q13495 774 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 ACVR2BQ13705 512 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 ZCCHC9Q8N567 271 aaKnown RBP21.47■■□□□ 1.03
RCN1-201ENST00000054950 C12orf65Q9H3J6 166 aaKnown RBP21.47■■□□□ 1.03
RCN1-201ENST00000054950 VPS37BQ9H9H4 285 aa21.47■■□□□ 1.03
RCN1-201ENST00000054950 TESPA1A2RU30 521 aaPredicted RBP21.46■■□□□ 1.03
RCN1-201ENST00000054950 RPL7AP62424 266 aaKnown RBP21.46■■□□□ 1.03
RCN1-201ENST00000054950 GCNT1Q02742 428 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 C4orf19Q8IY42 314 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 TAB3Q8N5C8 712 aaPredicted RBP21.46■■□□□ 1.03
RCN1-201ENST00000054950 TMC2Q8TDI7 906 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 TLR3O15455 904 aaKnown RBP21.46■■□□□ 1.03
RCN1-201ENST00000054950 CYP1A1P04798 512 aaPredicted RBP21.46■■□□□ 1.03
RCN1-201ENST00000054950 ICAM1P05362 532 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 PSMC5P62195 406 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 FKBP1AP62942 108 aaKnown RBP21.46■■□□□ 1.03
RCN1-201ENST00000054950 GAD2Q05329 585 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 MOGSQ13724 837 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 FAM160B2Q86V87 743 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 GPD1LQ8N335 351 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 SYTL5Q8TDW5 730 aaPredicted RBP21.46■■□□□ 1.03
RCN1-201ENST00000054950 DENND1AQ8TEH3 1009 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 FBXL18Q96ME1 805 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 TRIM6Q9C030 488 aaPredicted RBP21.46■■□□□ 1.03
RCN1-201ENST00000054950 C10orf88Q9H8K7 445 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 FEM1BQ9UK73 627 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 ZNF148Q9UQR1 794 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 PCDHB2Q9Y5E7 798 aa21.46■■□□□ 1.03
RCN1-201ENST00000054950 LYPLA2O95372 231 aa21.45■■□□□ 1.03
RCN1-201ENST00000054950 CHRNA5P30532 468 aa21.45■■□□□ 1.03
RCN1-201ENST00000054950 ABL2P42684 1182 aa21.45■■□□□ 1.03
RCN1-201ENST00000054950 ACOT2P49753 483 aa21.45■■□□□ 1.03
RCN1-201ENST00000054950 ARSEP51690 589 aa21.45■■□□□ 1.03
RCN1-201ENST00000054950 NOP14P78316 857 aaKnown RBP21.45■■□□□ 1.03
RCN1-201ENST00000054950 GPS1Q13098 491 aa21.45■■□□□ 1.03
RCN1-201ENST00000054950 EFTUD2Q15029 972 aaKnown RBP eCLIP21.45■■□□□ 1.03
RCN1-201ENST00000054950 TXNRD3NBQ6F5E7 133 aa21.45■■□□□ 1.03
RCN1-201ENST00000054950 TMEM270Q6UE05 265 aa21.45■■□□□ 1.03
RCN1-201ENST00000054950 ANKMY2Q8IV38 441 aa21.45■■□□□ 1.03
RCN1-201ENST00000054950 NUMBLQ9Y6R0 609 aa21.45■■□□□ 1.03
RCN1-201ENST00000054950 WDR91A4D1P6 747 aa21.45■■□□□ 1.02
RCN1-201ENST00000054950 HLA-DRAP01903 254 aa21.45■■□□□ 1.02
RCN1-201ENST00000054950 TNNI1P19237 187 aa21.45■■□□□ 1.02
RCN1-201ENST00000054950 CA4P22748 312 aa21.45■■□□□ 1.02
RCN1-201ENST00000054950 EPHB2P29323 1055 aa21.45■■□□□ 1.02
RCN1-201ENST00000054950 TDRD10Q5VZ19 366 aaKnown RBP21.45■■□□□ 1.02
RCN1-201ENST00000054950 MFSD7Q6UXD7 560 aa21.45■■□□□ 1.02
RCN1-201ENST00000054950 TAS1R3Q7RTX0 852 aa21.45■■□□□ 1.02
RCN1-201ENST00000054950 MICAL1Q8TDZ2 1067 aa21.45■■□□□ 1.02
RCN1-201ENST00000054950 SPDL1Q96EA4 605 aa21.45■■□□□ 1.02
RCN1-201ENST00000054950 LRRC37BQ96QE4 947 aa21.45■■□□□ 1.02
RCN1-201ENST00000054950 SYNPO2Q9UMS6 1093 aa21.45■■□□□ 1.02
RCN1-201ENST00000054950 ACTL7BQ9Y614 415 aa21.45■■□□□ 1.02
RCN1-201ENST00000054950 H0Y3Z8 333 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 PSTPIP1O43586 416 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 LIASO43766 372 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 T-ENOLP0DO92 83 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 PTGER2P43116 358 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 SNRPFP62306 86 aaKnown RBP21.44■■□□□ 1.02
RCN1-201ENST00000054950 SLC27A3Q5K4L6 730 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 TRIM68Q6AZZ1 485 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 KATNAL2Q8IYT4 538 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 ZBED8Q8IZ13 594 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 CEP170P1Q96L14 293 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 APOBEC3GQ9HC16 384 aaKnown RBP21.44■■□□□ 1.02
RCN1-201ENST00000054950 TXLNGQ9NUQ3 528 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 STARD13Q9Y3M8 1113 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 PIK3CAP42336 1068 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 RPS6P62753 249 aaKnown RBP21.44■■□□□ 1.02
RCN1-201ENST00000054950 NOMO3P69849 1222 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 CCDC15Q0P6D6 951 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 NFX1Q12986 1120 aaKnown RBP21.44■■□□□ 1.02
RCN1-201ENST00000054950 SETDB1Q15047 1291 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 FAM182AQ5T1J6 154 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.44■■□□□ 1.02
RCN1-201ENST00000054950 CFAP57Q96MR6 1250 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 TMOD2Q9NZR1 351 aa21.44■■□□□ 1.02
RCN1-201ENST00000054950 DNALI1O14645 258 aaPredicted RBP21.43■■□□□ 1.02
RCN1-201ENST00000054950 ZNF862O60290 1169 aa21.43■■□□□ 1.02
RCN1-201ENST00000054950 SKIV2L2P42285 1042 aaKnown RBP21.43■■□□□ 1.02
RCN1-201ENST00000054950 SPARCL1Q14515 664 aa21.43■■□□□ 1.02
RCN1-201ENST00000054950 PGM5Q15124 567 aa21.43■■□□□ 1.02
RCN1-201ENST00000054950 TAF11Q15544 211 aa21.43■■□□□ 1.02
RCN1-201ENST00000054950 PAXIP1Q6ZW49 1069 aaPredicted RBP21.43■■□□□ 1.02
RCN1-201ENST00000054950 FAM13CQ8NE31 585 aa21.43■■□□□ 1.02
RCN1-201ENST00000054950 CNKSR1Q969H4 720 aa21.43■■□□□ 1.02
RCN1-201ENST00000054950 GRAMD1AQ96CP6 724 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms