RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 ZNF148Q9UQR1 794 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 DENND3A2RUS2 1198 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 TCP10L2B9ZVM9 353 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 ASMTLO95671 621 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 MYBL1P10243 752 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 MAPTP10636 758 aaKnown RBP11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 EPHB2P29323 1055 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 PCK1P35558 622 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 CENPCQ03188 943 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 ATP13A4Q4VNC1 1196 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 TRABD2AQ86V40 505 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 CHURC1Q8WUH1 139 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 HAUS1Q96CS2 278 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 AGBL1Q96MI9 1066 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 NUDCD1Q96RS6 583 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 SMC6Q96SB8 1091 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 FHDC1Q9C0D6 1143 aaPredicted RBP11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 KIAA1586Q9HCI6 787 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 NEU2Q9Y3R4 380 aa11.14□□□□□ -0.63
CX3CL1-201ENST00000006053 TAF1LQ8IZX4 1826 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 SMNDC1O75940 238 aaKnown RBP eCLIP11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 UNGP13051 313 aaPredicted RBP11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 RPA3P35244 121 aaPredicted RBP11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 ABL2P42684 1182 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 SLC1A1P43005 524 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 CCNG2Q16589 344 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 UGCGQ16739 394 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 PODNQ7Z5L7 613 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 ANKS1BQ7Z6G8 1248 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 DRAXINQ8NBI3 349 aaPredicted RBP11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 FAM13CQ8NE31 585 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 LBHD1Q9BQE6 289 aaPredicted RBP11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 ZCWPW1Q9H0M4 648 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 TBX20Q9UMR3 447 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 EXOC7Q9UPT5 735 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 STARD13Q9Y3M8 1113 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 PIAS1O75925 651 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 PROSCO94903 275 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 PDHA1P08559 390 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 FDX1P10109 184 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 CCDC15Q0P6D6 951 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 LAMB3Q13751 1172 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 POTEAQ6S8J7 498 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 RHOT1Q8IXI2 618 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 IWS1Q96ST2 819 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 TBC1D10AQ9BXI6 508 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 OSBPL1AQ9BXW6 950 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 RNPEPL1Q9HAU8 725 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 HOMER2Q9NSB8 354 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 C1orf112Q9NSG2 853 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 GRID1Q9ULK0 1009 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 ACTL7BQ9Y614 415 aa11.13□□□□□ -0.63
CX3CL1-201ENST00000006053 GOLGA8SH3BPF8 625 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 GOLGA8MH3BSY2 632 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 IFNB1P01574 187 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 CFHP08603 1231 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 CHRNA5P30532 468 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 ABCD1P33897 745 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 GPS1Q13098 491 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 SPP2Q13103 211 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 KLF1Q13351 362 aaPredicted RBP11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 SLC1A5Q15758 541 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 SLC5A9Q2M3M2 681 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 CPXCR1Q8N123 301 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 AGGF1Q8N302 714 aaeCLIP11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 TTC8Q8TAM2 541 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 BICD1Q96G01 975 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 PRMT6Q96LA8 375 aaPredicted RBP11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 FAM213AQ9BRX8 229 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 LRMDAQ9H2I8 198 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 LMCD1Q9NZU5 365 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 COL20A1Q9P218 1284 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 DNPEPQ9ULA0 475 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 A0A1W2PPM1 405 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 CLRN2A0PK11 232 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 PEX11AO75192 247 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 BANF1O75531 89 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 ATP5HO75947 161 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 SETSIPP0DME0 302 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 CALB2P22676 271 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 NPTX2P47972 431 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 ARSEP51690 589 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 YARSP54577 528 aaKnown RBP11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 SESN3P58005 492 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 SPOPLQ6IQ16 392 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 ZBED8Q8IZ13 594 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 ZCCHC9Q8N567 271 aaKnown RBP11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 TAB3Q8N5C8 712 aaPredicted RBP11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 RANBP17Q9H2T7 1088 aaKnown RBP11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 KMT5AQ9NQR1 393 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 DCTN4Q9UJW0 460 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 CCPG1Q9ULG6 757 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 USP20Q9Y2K6 914 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 COQ4Q9Y3A0 265 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 MYPNQ86TC9 1320 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 NFIBO00712 420 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 ECE2O60344 883 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 DCTN3O75935 186 aa11.12□□□□□ -0.63
CX3CL1-201ENST00000006053 MYCLP12524 364 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms