RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Nom1Q3UFM5 854 aaKnown RBP9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Psg29Q3URN6 468 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Tnni3kQ5GIG6 834 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Rnf43Q5NCP0 784 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Fbxw11Q5SRY7 542 aaKnown RBP9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Zfp251Q6PCX8 632 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Ccdc88cQ6VGS5 2009 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Sox11Q7M6Y2 395 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Zbtb5Q7TQG0 670 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Rspo4Q8BJ73 228 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 CptpQ8BS40 216 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Klhl30Q8C3F7 581 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Gm17324Q8C6J8 137 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Fam221aQ8C790 301 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Ttc23Q8CHY7 488 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Stxbp5Q8K400 1152 aaKnown RBP9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Taf6lQ8R2K4 616 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Rps6kl1Q8R2S1 544 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Pcdhb18Q91Y02 792 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 HgsQ99LI8 775 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Tpcn1Q9EQJ0 817 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Extl2Q9ES89 330 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Rnf14Q9JI90 485 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Nova1Q9JKN6 507 aaKnown RBP9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Arl6ip4Q9JM93 229 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Itga2bQ9QUM0 1033 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Trp53inp1Q9QXE4 239 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Egfl7Q9QXT5 275 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Padi3Q9Z184 664 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Alms1Q8K4E0 3251 aa9.35□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Pcdh11xF6ZNL5 1338 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Dmrtb1A2A9I7 359 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 PotegA5H0M4 473 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Herc3A6H6S0 1050 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Krt78E9Q0F0 1068 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Srsf11E9Q6E5 511 aaKnown RBP9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Plekha5E9Q6H8 1269 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Zfp358E9Q8M1 571 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Taf4E9QAP7 1042 aaKnown RBP9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Ugt1a6bK9J7B2 531 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Vmn2r71L7N2D8 855 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 GclmO09172 274 aaKnown RBP9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Clk2O35491 499 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 ChadO55226 358 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Grem1O70326 184 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 DtnbO70585 659 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Lsp1P19973 330 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Kcnj2P35561 428 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Pbx1P41778 430 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Tpm1P58771 284 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Drp2Q05AA6 957 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Lmntd2Q0VET5 664 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Edem3Q2HXL6 931 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Pnpla5Q32LZ8 432 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Hexim2Q3TVI4 313 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Rufy4Q3TYX8 563 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Smcr8Q3UMB5 935 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Grik1Q60934 836 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Ift88Q61371 824 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Ugt1a6Q64435 531 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 N4bp1Q6A037 893 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Cep135Q6P5D4 1140 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Shkbp1Q6P7W2 704 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Fhod1Q6P9Q4 1197 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Ugt1a7cQ6ZQM8 531 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Nop9Q8BMC4 636 aaKnown RBP9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 CgasQ8C6L5 507 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Galnt6Q8C7U7 622 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Brd3Q8K2F0 726 aaKnown RBP9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Fbxo18Q8K2I9 1042 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Traf3ip2Q8N7N6 555 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Tesk2Q8VCT9 570 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 SharpinQ91WA6 380 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 DlstQ9D2G2 454 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Vps33aQ9D2N9 598 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 SetQ9EQU5 289 aaKnown RBP9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Doc2gQ9ESN1 387 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 B4galt4Q9JJ04 344 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Nr4a3Q9QZB6 627 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Sgk1Q9WVC6 431 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 Zfhx4Q9JJN2 3550 aa9.34□□□□□ -0.91
Pdlim5-209ENSMUST00000196908 1700017N19RikA0A087WPJ1 469 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Cyp2j7A0A140T8U1 504 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 1700001O22RikA2APZ1 375 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Gm10718D3Z1I7 227 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Vmn2r17E9PYF5 849 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Rsph10bE9PYQ0 876 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Pias3O54714 628 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Nr1i2O54915 431 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Msh3P13705 1091 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Gna11P21278 359 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 FechP22315 420 aaKnown RBP9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Sox18P43680 377 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Frat1P70339 274 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Grm2Q14BI2 872 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Zfyve27Q3TXX3 415 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Slc9a2Q3ZAS0 814 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Nxf2Q4ZGD8 691 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Xkr4Q5GH67 647 aa9.33□□□□□ -0.92
Pdlim5-209ENSMUST00000196908 Frem3Q5H8B9 2123 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms