RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Ube4bQ9ES00 1173 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Capn7Q9R1S8 813 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Atp6v1c1Q9Z1G3 382 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Erich2E9Q1A6 463 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Srpk1O70551 648 aaKnown RBP11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Gm1604bQ3TRG0 118 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Hsph1Q61699 858 aaKnown RBP11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Tmc3Q7TQ69 1130 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Dus1lQ8C2P3 475 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Fam204aQ8C6C7 236 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Depdc1aQ8CIG0 804 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 HscbQ8K3A0 234 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Plekhh3Q8VCE9 796 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Cdc26Q99JP4 85 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Bbs5Q9CZQ9 341 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Nr1h3Q9Z0Y9 445 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 AspgA0JNU3 564 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Gm3424L7N298 263 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Gm8246M0QWX9 263 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Capn6O35646 641 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Tpp2Q64514 1262 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Zfp454Q80Y34 536 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Morc4Q8BMD7 928 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Slc39a13Q8BZH0 361 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Clip4Q8CI96 704 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Nmd3Q99L48 503 aaKnown RBP11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Tlr3Q99MB1 905 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Arl8bQ9CQW2 186 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Gdap2Q9DBL2 498 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Clec4aQ9QZ15 238 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ptk2P34152 1090 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 GabpaQ00422 454 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 GsapQ3TCV3 858 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Pyroxd1Q3TMV7 498 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Znf746Q3U133 652 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Adrbk2Q3UYH7 688 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 DeptorQ570Y9 409 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Supt20hQ7TT00 530 aaKnown RBP11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Usp1Q8BJQ2 784 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Armc6Q8BNU0 468 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Mtif2Q91YJ5 727 aaKnown RBP11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Actrt1Q9D9J3 376 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Zscan4-ps3A0A1B0GRH6 506 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Zscan4-ps2A0A1C7CYU6 506 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Taf4E9QAP7 1042 aaKnown RBP11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Pagr1bF6V0H0 108 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 NxnP97346 435 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Q14AM7 275 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rbm12b1Q80YR9 836 aaKnown RBP11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ccdc68Q8BVC4 333 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Trim60Q8VI40 466 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rex1bdQ9CYZ6 169 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 CitP49025 2055 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Zbed6D2EAC2 980 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rpl21O09167 160 aaKnown RBP11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Nptx2O70340 429 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Chrm1P12657 460 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Prmt9Q3U3W5 846 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Atxn7l3bQ3UD01 97 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Fam107aQ78TU8 144 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rccd1Q8BTU7 377 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 OafQ8QZR4 282 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Klhl36Q8R124 613 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Angel1Q8VCU0 667 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Tbrg4Q91YM4 630 aaKnown RBP11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Nek8Q91ZR4 698 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ap2b1Q9DBG3 937 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Maged2Q9ER67 616 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Mon2Q80TL7 1715 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Bmpr2O35607 1038 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 E330034G19RikQ3UWX6 351 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rps6kc1Q8BLK9 1056 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Clasp2Q8BRT1 1286 aaKnown RBP11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 PygbQ8CI94 843 aaKnown RBP11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Pdk3Q922H2 415 aaKnown RBP11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 YwhabQ9CQV8 246 aaKnown RBP11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Mms19Q9D071 1031 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Tmod4Q9JLH8 345 aa11.91□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Col14a1Q80X19 1797 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 AdssP46664 456 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 LipeP54310 759 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 rp9P97762 213 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Inpp4bQ6P1Y8 924 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Acap2Q6ZQK5 770 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ece2Q80Z60 881 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ube2q2Q8K2Z8 378 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ddx39aQ8VDW0 427 aaKnown RBP11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Caap1Q8VDY9 356 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Cep72Q9D3R3 646 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Tmem81Q9D5K1 259 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 IvdQ9JHI5 424 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Cnga3Q9JJZ8 631 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Nudt5Q9JKX6 218 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Klrc1Q9Z202 244 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 1700024B05RikE9Q6D7 167 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ces1cP23953 554 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Tnni3P48787 211 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Pglyrp2Q8VCS0 530 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Dnajb7Q9QYI8 312 aa11.9□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Alpk3Q924C5 1678 aa11.9□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms