RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Fam47cQ14BE7 430 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Qrich1Q3UA37 777 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Adrbk2Q3UYH7 688 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Vps37aQ8CHS8 397 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Dnajc28Q8VCE1 385 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Abca16E9PWJ7 1678 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm8257E9Q8R3 264 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 StilQ60988 1262 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Utp14bQ6EJB6 756 aaKnown RBP10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 TbataQ7TSD4 393 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tlk1Q8C0V0 766 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ropn1Q9ESG2 212 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Nmt1O70310 496 aaKnown RBP10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Epb41P48193 858 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Sash1P59808 1230 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Map4k1P70218 827 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Shc3Q61120 474 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Arhgap26Q6ZQ82 814 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Sorcs3Q8VI51 1219 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 GsdmcQ99NB5 468 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Psmd12Q9D8W5 456 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Mrpl46Q9EQI8 283 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Bnip3lQ9Z2F7 218 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 SftpdP50404 374 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Fam102aQ78T81 392 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Kbtbd3Q8BHI4 607 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gtf3c4Q8BMQ2 817 aaKnown RBP10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Zfp263Q8CF60 680 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Wdr47Q8CGF6 920 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Defb15Q8R2I5 79 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Golph3Q9CRA5 298 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Fam162aQ9D6U8 155 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Actrt1Q9D9J3 376 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Git2Q9JLQ2 708 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Dnajc12Q9R022 198 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Cdc25cP48967 447 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pon1P52430 355 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Kcnma1Q08460 1209 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 CcnjlQ5SRT8 387 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Fbxw10Q5SUS0 1030 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Krt73Q6NXH9 539 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Usp50Q6P8X6 390 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Susd4Q8BH32 490 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pak5Q8C015 719 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Olfr390Q8VEZ7 311 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ska2Q9CR46 120 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ndufaf1Q9CWX2 328 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tbk1Q9WUN2 729 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 RalaP63321 206 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Oog4Q4G0C7 502 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 GancQ8BVW0 898 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Btbd7Q8CFE5 1130 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 R3hdm1E9Q9Q2 1135 aaKnown RBP10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gstt1Q64471 240 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Fbxw7Q8VBV4 629 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tbc1d19Q8VDV7 526 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pabpc6Q9D4E6 643 aaKnown RBP10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rmi1Q9D4G9 616 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tjap1Q9DCD5 539 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Kat2bQ9JHD1 813 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Trpc4Q9QUQ5 974 aa10.61□□□□□ -0.71
Ubr1-201ENSMUST00000028728 PigrO70570 771 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Samd11Q1RNF8 542 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ankrd34bQ3UUF8 508 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ppp1r13lQ5I1X5 824 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pnma1Q8C1C8 353 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Alg3Q8K2A8 438 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Reep2Q8VCD6 254 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm16430A6X8J1 155 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 NuggcD3YWJ0 796 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Shoc2O88520 582 aaKnown RBP10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Irf8P23611 424 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rpl5P47962 297 aaKnown RBP10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Acsbg2Q2XU92 667 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Atp6v0d2Q80SY3 350 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Dnph1Q80VJ3 173 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 4933409G03RikQ8C5U0 320 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Slxl1Q9D515 155 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ext2P70428 718 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tom1l2Q5SRX1 507 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Arid3aQ62431 601 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Dclk2Q6PGN3 756 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Btnl1Q7TST0 509 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rev1Q920Q2 1249 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Eps8l2Q99K30 729 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Abcg8Q9DBM0 673 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Cdc42bpaQ3UU96 1719 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Xirp1O70373 1129 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ces1cP23953 554 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Psmd7P26516 321 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 RalgdsQ03385 852 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 HnrnpdQ60668 355 aaKnown RBP10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Lig4Q8BTF7 911 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ago2Q8CJG0 860 aaKnown RBP10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 TgdsQ8VDR7 355 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 BrdtQ91Y44 956 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 NvlQ9DBY8 855 aaKnown RBP10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Drg2Q9QXB9 364 aaKnown RBP10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gjb4Q02738 266 aa10.6□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pick1Q62083 416 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms