RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Slc5a4aQ9ET37 656 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Serpinb3aG3X9V8 387 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Cyp2b9P12790 491 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Fgl2P12804 432 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 ZfxP17012 799 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Ly9Q01965 654 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Dnajc8Q6NZB0 253 aaKnown RBP15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Slitrk1Q810C1 696 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Slc12a9Q99MR3 914 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Cuedc2Q9CXX9 284 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 TarsQ9D0R2 722 aaKnown RBP15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Cep72Q9D3R3 646 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Hsf2bpQ9D4G2 338 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Capn15Q9JLG8 1095 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Mpp2Q9WV34 552 aa15.92■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Upf3bQ3ULL6 472 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Birc2Q62210 612 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 AmphQ7TQF7 686 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 PhkbQ7TSH2 1085 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Ush1gQ80T11 461 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Rassf9Q8K342 435 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Cetn2Q9R1K9 172 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Gadd45gQ9Z111 159 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Arhgef10Q8C033 1345 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 SpibO35906 267 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Il2rbP16297 539 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Myl6Q60605 151 aaKnown RBP15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Soat1Q61263 540 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Krt77Q6IFZ6 572 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Proser2Q8C5R2 471 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Gpc5Q8CAL5 572 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Castor1Q9CWQ8 331 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Isl2Q9CXV0 359 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Net1Q9Z206 595 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Zgrf1Q0VGT4 1863 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 MafgO54790 162 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Impa1O55023 277 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 NyxP83503 476 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 LnpkQ7TQ95 425 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Orai2Q8BH10 250 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Spata21Q8BHW6 681 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Rell1Q8K2J7 272 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Thap12Q9CUX1 758 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Med10Q9CXU0 135 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Rdh14Q9ERI6 334 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Tmed2Q9R0Q3 201 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Slc26a3Q9WVC8 757 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 B3galt4Q9Z0F0 371 aa15.91■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Xbp1O35426 267 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 PrkchP23298 683 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Hoxc10P31257 342 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Cnga4Q3UW12 575 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Phactr4Q501J7 694 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Tdpoz4Q6YCH2 370 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Dzip3Q7TPV2 1204 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 C2cd2lQ80X80 706 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Ccser1Q8C0C4 895 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Prpf31Q8CCF0 499 aaKnown RBP15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Hectd2Q8CDU6 774 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Cd300ldQ8VCH2 221 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Ascc2Q91WR3 749 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Pcdha9Q91Y11 979 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Lpgat1Q91YX5 370 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Q99KU6 348 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Vta1Q9CR26 309 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Irx5Q9JKQ4 484 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Trip11E9Q512 1976 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Zscan4-ps1A0A1C7CYV3 506 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Zscan4dA7KBS4 506 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Mov10P23249 1004 aaKnown RBP15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Rab21P35282 222 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Uchl4P58321 233 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Foxp2P58463 714 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Atp11aP98197 1187 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Zscan4fQ3URS2 506 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Ppp4r3cQ3V0Y1 813 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Zscan4cQ80VJ6 506 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Slc7a14Q8BXR1 771 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Rpp40Q8R1F9 363 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Anapc7Q9WVM3 565 aa15.9■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 NrapQ80XB4 1728 aa15.89■□□□□ 0.14
Nkx3-1-201ENSMUST00000022646 Oprl1P35377 367 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Tff2Q03404 129 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Nudt16Q6P3D0 195 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Agap1Q8BXK8 857 aaKnown RBP15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Foxp3Q99JB6 429 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Psmc4P54775 418 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Kcnn2P58390 839 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Smyd5Q3TYX3 416 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Fam81aQ3UXZ6 364 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Dupd1Q8BK84 215 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Sh2d5Q8JZW5 429 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 DpysQ9EQF5 519 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Lonrf1D3YY23 762 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 SbdsP70122 250 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Trim43bP86448 445 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Cyp2j11Q3UNV2 504 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Gm13103Q4VAD2 491 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Rgl2Q61193 778 aa15.89■□□□□ 0.13
Nkx3-1-201ENSMUST00000022646 Atl2Q6PA06 583 aa15.89■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms