RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ppp1r3aQ99MR9 1089 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Nde1Q9CZA6 344 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Cpb2Q9JHH6 422 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Cnga3Q9JJZ8 631 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Hao1Q9WU19 370 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Skint3A7TZF0 458 aa11.46□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rasa2P58069 847 aa11.46□□□□□ -0.58
Msh3-201ENSMUST00000022220 Crnkl1P63154 690 aaKnown RBP11.46□□□□□ -0.58
Msh3-201ENSMUST00000022220 Spink5Q148R4 1017 aa11.46□□□□□ -0.58
Msh3-201ENSMUST00000022220 Edem3Q2HXL6 931 aa11.46□□□□□ -0.58
Msh3-201ENSMUST00000022220 Fam193bQ3U2K0 892 aa11.46□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tmc3Q7TQ69 1130 aa11.46□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ldlrap1Q8C142 308 aa11.46□□□□□ -0.58
Msh3-201ENSMUST00000022220 Pnpt1Q8K1R3 783 aaKnown RBP11.46□□□□□ -0.58
Msh3-201ENSMUST00000022220 Alas1Q8VC19 642 aa11.46□□□□□ -0.58
Msh3-201ENSMUST00000022220 Noxred1Q9D3S5 366 aa11.46□□□□□ -0.58
Msh3-201ENSMUST00000022220 Xab2Q9DCD2 855 aaKnown RBP11.46□□□□□ -0.58
Msh3-201ENSMUST00000022220 Bfsp1A2AMT1 669 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Exoc7O35250 697 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Kcnu1O54982 1121 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 CidebO70303 219 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 YwhagP61982 247 aaKnown RBP11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Trim43cP86449 446 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Arl13bQ640N2 427 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 IqceQ6PCQ0 778 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ssxb10Q6XAR7 170 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Znf12Q7TSI0 686 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Enoph1Q8BGB7 257 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Dusp19Q8K4T5 220 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Pcdhb3Q91XZ7 784 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ptdss1Q99LH2 473 aaKnown RBP11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rtn3Q9ES97 964 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Fbxo16Q9QZM9 334 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Col3a1P08121 1464 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gm5926E9PWJ8 236 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Cdr1E9Q0B4 517 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gm3182K7N6T8 263 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Nedd9O35177 833 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ugt1a2P70691 533 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Cdca2Q14B71 982 aaKnown RBP11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Pid1Q3UBG2 217 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ag2Q3UPL5 249 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Hsph1Q61699 858 aaKnown RBP11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Papd5Q68ED3 633 aaKnown RBP11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ckap2lQ7TS74 745 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Uba3Q8C878 462 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Wbp11Q923D5 641 aaKnown RBP11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rtfdc1Q99K95 307 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Llcfc1Q9D9P8 108 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 FignQ9ERZ6 759 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Sfmbt1Q9JMD1 863 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Efcab12V9GXH0 673 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tcp11x2A2AEI7 503 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rabgap1A2AWA9 1064 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Hnrnph3D3Z3N4 346 aaKnown RBP11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Cyp2b10P12791 500 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Kcna3P16390 528 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ccr1P51675 355 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ppp3caP63328 521 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Trim72Q1XH17 477 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Garnl3Q3V0G7 1038 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Zbtb8osQ505B7 168 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Smg5Q6ZPY2 1017 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Fam102aQ78T81 392 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Sh3tc2Q80VA5 1289 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Btnl9Q8BJE2 536 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 EmsyQ8BMB0 1264 aaKnown RBP11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Smtnl2Q8CI12 456 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rmi1Q9D4G9 616 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Tmem79Q9D709 391 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Atp13a1Q9EPE9 1200 aaKnown RBP11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 Gabbr1Q9WV18 960 aa11.45□□□□□ -0.58
Msh3-201ENSMUST00000022220 PkmP52480 531 aaKnown RBP11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Dab2ipQ3UHC7 1189 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Btg1-ps1Q3V0S2 161 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Btg1-ps2Q3V0X0 161 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Krt35Q497I4 455 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Rap1gap2Q5SVL6 712 aaKnown RBP11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 PodnQ7TQ62 611 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 SnphQ80U23 495 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Mageb18Q8BQR7 327 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Kcns3Q8BQZ8 491 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 EtnpplQ8BWU8 499 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Olfr1494Q8VGP8 315 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 BrdtQ91Y44 956 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ophn1Q99J31 802 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ppp1r3gQ9CW07 347 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Q9CYI0 393 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Jph2Q9ET78 696 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Sept6Q9R1T4 434 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 PapolbQ9WVP6 641 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Myh4Q5SX39 1939 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Map1bP14873 2464 aaKnown RBP11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Patl2A2ARM1 529 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Grik3B1AS29 919 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Ebf2O08792 575 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 UncxO08934 530 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Timm44O35857 452 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 Aoc3O70423 765 aa11.44□□□□□ -0.58
Msh3-201ENSMUST00000022220 CopeO89079 308 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms