RNA–Protein interactions for RNA: YPR072W

NOT5, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeast

Gene NOT5, Length 1,683 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOT5	YPR072W	AHP1	P38013	176 aa	Known RBP	4.72	□□□□□ -1.65
NOT5	YPR072W	TBS1	P38114	1094 aa		4.72	□□□□□ -1.65
NOT5	YPR072W	SOH1	P38633	127 aa		4.71	□□□□□ -1.66
NOT5	YPR072W	SLX8	P40072	274 aa		4.71	□□□□□ -1.66
NOT5	YPR072W	SUM1	P46676	1062 aa		4.71	□□□□□ -1.66
NOT5	YPR072W	YDR461C-A	Q2V2P7	80 aa		4.71	□□□□□ -1.66
NOT5	YPR072W	KRE33	P53914	1056 aa	Known RBP	4.7	□□□□□ -1.66
NOT5	YPR072W	UTP13	Q05946	817 aa	Known RBP	4.7	□□□□□ -1.66
NOT5	YPR072W	JJJ2	P46997	583 aa		4.7	□□□□□ -1.66
NOT5	YPR072W	ADE12	P80210	433 aa	Known RBP	4.7	□□□□□ -1.66
NOT5	YPR072W	HDA3	Q06623	655 aa		4.7	□□□□□ -1.66
NOT5	YPR072W	SUP45	P12385	437 aa	Known RBP	4.69	□□□□□ -1.66
NOT5	YPR072W	SHM1	P37292	490 aa	Predicted RBP	4.69	□□□□□ -1.66
NOT5	YPR072W	ATG3	P40344	310 aa		4.69	□□□□□ -1.66
NOT5	YPR072W	YPP1	P46951	817 aa		4.69	□□□□□ -1.66
NOT5	YPR072W	ENO2	P00925	437 aa	Known RBP	4.68	□□□□□ -1.66
NOT5	YPR072W	SBE2	P42223	864 aa	Known RBP	4.68	□□□□□ -1.66
NOT5	YPR072W	ALA1	P40825	983 aa	Known RBP	4.67	□□□□□ -1.66
NOT5	YPR072W	CCT8	P47079	568 aa	Known RBP	4.67	□□□□□ -1.66
NOT5	YPR072W	YNL108C	P53929	270 aa		4.67	□□□□□ -1.66
NOT5	YPR072W	IRE1	P32361	1115 aa		4.67	□□□□□ -1.66
NOT5	YPR072W	YPR053C	Q6Q5F3	151 aa		4.67	□□□□□ -1.66
NOT5	YPR072W	RIM21	P48565	533 aa		4.66	□□□□□ -1.66
NOT5	YPR072W	TDA6	Q06466	467 aa		4.65	□□□□□ -1.66
NOT5	YPR072W	PSH1	Q12161	406 aa		4.65	□□□□□ -1.66
NOT5	YPR072W	RDS2	P19541	446 aa	Known RBP	4.64	□□□□□ -1.67
NOT5	YPR072W	PDC6	P26263	563 aa	Known RBP	4.64	□□□□□ -1.67
NOT5	YPR072W	YPQ2	Q06328	317 aa		4.64	□□□□□ -1.67
NOT5	YPR072W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
NOT5	YPR072W	GPM1	P00950	247 aa	Known RBP	4.64	□□□□□ -1.67
NOT5	YPR072W	FPS1	P23900	669 aa		4.63	□□□□□ -1.67
NOT5	YPR072W	SKN7	P38889	622 aa		4.63	□□□□□ -1.67
NOT5	YPR072W	RPS31	P05759	152 aa	Known RBP	4.62	□□□□□ -1.67
NOT5	YPR072W	SWI5	P08153	709 aa		4.62	□□□□□ -1.67
NOT5	YPR072W	MRPL16	P38064	232 aa		4.62	□□□□□ -1.67
NOT5	YPR072W	AIM9	P40053	627 aa	Known RBP	4.61	□□□□□ -1.67
NOT5	YPR072W	STB3	Q12427	513 aa		4.61	□□□□□ -1.67
NOT5	YPR072W	YNR014W	P53719	212 aa		4.61	□□□□□ -1.67
NOT5	YPR072W	YMR187C	Q03236	431 aa		4.61	□□□□□ -1.67
NOT5	YPR072W	MCX1	P38323	520 aa	Predicted RBP	4.6	□□□□□ -1.67
NOT5	YPR072W	SPR3	P41901	512 aa		4.6	□□□□□ -1.67
NOT5	YPR072W	YJL007C	P47080	104 aa		4.6	□□□□□ -1.67
NOT5	YPR072W	RPS6A	P0CX37	236 aa	Known RBP	4.59	□□□□□ -1.67
NOT5	YPR072W	RPS6B	P0CX38	236 aa	Predicted RBP	4.59	□□□□□ -1.67
NOT5	YPR072W	YNL165W	P53891	406 aa		4.59	□□□□□ -1.67
NOT5	YPR072W	LEU1	P07264	779 aa	Known RBP	4.58	□□□□□ -1.68
NOT5	YPR072W	YCK2	P23292	546 aa	Known RBP	4.58	□□□□□ -1.68
NOT5	YPR072W	ALD2	P47771	506 aa		4.58	□□□□□ -1.68
NOT5	YPR072W	MRX10	Q05648	414 aa		4.58	□□□□□ -1.68
NOT5	YPR072W	MCM1	P11746	286 aa		4.57	□□□□□ -1.68
NOT5	YPR072W	PDC5	P16467	563 aa	Known RBP	4.57	□□□□□ -1.68
NOT5	YPR072W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
NOT5	YPR072W	TY1A-DR2	Q03964	440 aa	Known RBP	4.57	□□□□□ -1.68
NOT5	YPR072W	ENO1	P00924	437 aa	Known RBP	4.57	□□□□□ -1.68
NOT5	YPR072W	KNS1	P32350	737 aa	Predicted RBP	4.57	□□□□□ -1.68
NOT5	YPR072W	BOI2	P39969	1040 aa		4.57	□□□□□ -1.68
NOT5	YPR072W	YDR215C	Q12240	137 aa		4.57	□□□□□ -1.68
NOT5	YPR072W	NTH2	P35172	780 aa		4.56	□□□□□ -1.68
NOT5	YPR072W	MSC7	P38694	644 aa		4.56	□□□□□ -1.68
NOT5	YPR072W	YFL034W	P43564	1073 aa		4.56	□□□□□ -1.68
NOT5	YPR072W	ATG32	P40458	529 aa		4.55	□□□□□ -1.68
NOT5	YPR072W	RGP1	P16664	663 aa		4.54	□□□□□ -1.68
NOT5	YPR072W	MLF3	P32047	452 aa		4.54	□□□□□ -1.68
NOT5	YPR072W	SLN1	P39928	1220 aa	Predicted RBP	4.54	□□□□□ -1.68
NOT5	YPR072W	BIM1	P40013	344 aa		4.54	□□□□□ -1.68
NOT5	YPR072W	TIF1	P10081	395 aa	Known RBP	4.54	□□□□□ -1.68
NOT5	YPR072W	PDI1	P17967	522 aa	Known RBP	4.54	□□□□□ -1.68
NOT5	YPR072W	MET1	P36150	593 aa		4.54	□□□□□ -1.68
NOT5	YPR072W	SBP1	P10080	294 aa	Known RBP	4.53	□□□□□ -1.68
NOT5	YPR072W	PEP12	P32854	288 aa		4.53	□□□□□ -1.68
NOT5	YPR072W	TSC13	Q99190	310 aa		4.53	□□□□□ -1.68
NOT5	YPR072W	YTA6	P40328	754 aa		4.52	□□□□□ -1.69
NOT5	YPR072W	RPP1A	P05318	106 aa	Predicted RBP	4.51	□□□□□ -1.69
NOT5	YPR072W	RTG2	P32608	588 aa	Known RBP	4.51	□□□□□ -1.69
NOT5	YPR072W	AMN1	P38285	549 aa	Predicted RBP	4.51	□□□□□ -1.69
NOT5	YPR072W	MCA1	Q08601	432 aa		4.51	□□□□□ -1.69
NOT5	YPR072W	Q0182	Q9ZZW1	134 aa		4.51	□□□□□ -1.69
NOT5	YPR072W	CYT1	P07143	309 aa		4.51	□□□□□ -1.69
NOT5	YPR072W	TAT1	P38085	619 aa		4.48	□□□□□ -1.69
NOT5	YPR072W	RPL34B	P40525	121 aa	Known RBP	4.48	□□□□□ -1.69
NOT5	YPR072W	PRY1	P47032	299 aa		4.48	□□□□□ -1.69
NOT5	YPR072W	ACS2	P52910	683 aa	Known RBP	4.48	□□□□□ -1.69
NOT5	YPR072W	LSB6	P42951	607 aa		4.48	□□□□□ -1.69
NOT5	YPR072W	GLT1	Q12680	2145 aa	Known RBP	4.47	□□□□□ -1.69
NOT5	YPR072W	UBP1	P25037	809 aa		4.47	□□□□□ -1.69
NOT5	YPR072W	PHO87	P25360	923 aa		4.47	□□□□□ -1.69
NOT5	YPR072W	PRK1	P40494	810 aa		4.47	□□□□□ -1.69
NOT5	YPR072W	SKP1	P52286	194 aa		4.47	□□□□□ -1.69
NOT5	YPR072W	MTO1	P53070	669 aa		4.47	□□□□□ -1.69
NOT5	YPR072W	HEH2	Q03281	663 aa		4.47	□□□□□ -1.69
NOT5	YPR072W	UTP4	Q06679	776 aa	Known RBP	4.47	□□□□□ -1.69
NOT5	YPR072W	KTR7	P40504	517 aa		4.46	□□□□□ -1.7
NOT5	YPR072W	PGM2	P37012	569 aa	Known RBP	4.45	□□□□□ -1.7
NOT5	YPR072W	TPS3	P38426	1054 aa	Known RBP	4.45	□□□□□ -1.7
NOT5	YPR072W	SCD5	P34758	872 aa		4.45	□□□□□ -1.7
NOT5	YPR072W	ALG14	P38242	237 aa		4.45	□□□□□ -1.7
NOT5	YPR072W	HXT5	P38695	592 aa		4.45	□□□□□ -1.7
NOT5	YPR072W	HGH1	P48362	394 aa	Known RBP	4.45	□□□□□ -1.7
NOT5	YPR072W	GAS4	Q08271	471 aa		4.45	□□□□□ -1.7
NOT5	YPR072W	NHA1	Q99271	985 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms