RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C THI72Q08579 599 aa7.14□□□□□ -1.27
CUP9YPL177C YDR461C-AQ2V2P7 80 aa7.14□□□□□ -1.27
CUP9YPL177C AHP1P38013 176 aaKnown RBP7.13□□□□□ -1.27
CUP9YPL177C TBS1P38114 1094 aa7.13□□□□□ -1.27
CUP9YPL177C UTP7P40055 554 aaKnown RBP7.13□□□□□ -1.27
CUP9YPL177C SLX8P40072 274 aa7.13□□□□□ -1.27
CUP9YPL177C SUM1P46676 1062 aa7.13□□□□□ -1.27
CUP9YPL177C SOH1P38633 127 aa7.12□□□□□ -1.27
CUP9YPL177C SUP45P12385 437 aaKnown RBP7.11□□□□□ -1.27
CUP9YPL177C KRE33P53914 1056 aaKnown RBP7.11□□□□□ -1.27
CUP9YPL177C ATG3P40344 310 aa7.1□□□□□ -1.27
CUP9YPL177C YPP1P46951 817 aa7.1□□□□□ -1.27
CUP9YPL177C JJJ2P46997 583 aa7.1□□□□□ -1.27
CUP9YPL177C ADE12P80210 433 aaKnown RBP7.1□□□□□ -1.27
CUP9YPL177C SHM1P37292 490 aaPredicted RBP7.09□□□□□ -1.27
CUP9YPL177C HDA3Q06623 655 aa7.09□□□□□ -1.27
CUP9YPL177C ENO2P00925 437 aaKnown RBP7.08□□□□□ -1.28
CUP9YPL177C CCT8P47079 568 aaKnown RBP7.07□□□□□ -1.28
CUP9YPL177C IRE1P32361 1115 aa7.06□□□□□ -1.28
CUP9YPL177C SBE2P42223 864 aaKnown RBP7.06□□□□□ -1.28
CUP9YPL177C YNL108CP53929 270 aa7.06□□□□□ -1.28
CUP9YPL177C ALA1P40825 983 aaKnown RBP7.05□□□□□ -1.28
CUP9YPL177C RIM21P48565 533 aa7.05□□□□□ -1.28
CUP9YPL177C YPR053CQ6Q5F3 151 aa7.05□□□□□ -1.28
CUP9YPL177C RDS2P19541 446 aaKnown RBP7.04□□□□□ -1.28
CUP9YPL177C PSH1Q12161 406 aa7.04□□□□□ -1.28
CUP9YPL177C YPQ2Q06328 317 aa7.03□□□□□ -1.28
CUP9YPL177C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
CUP9YPL177C PDC6P26263 563 aaKnown RBP7.02□□□□□ -1.29
CUP9YPL177C TDA6Q06466 467 aa7.02□□□□□ -1.29
CUP9YPL177C GPM1P00950 247 aaKnown RBP7.01□□□□□ -1.29
CUP9YPL177C RPS31P05759 152 aaKnown RBP7□□□□□ -1.29
CUP9YPL177C SKN7P38889 622 aa7□□□□□ -1.29
CUP9YPL177C DMA2P53924 522 aa7□□□□□ -1.29
CUP9YPL177C SWI5P08153 709 aa6.99□□□□□ -1.29
CUP9YPL177C FPS1P23900 669 aa6.99□□□□□ -1.29
CUP9YPL177C MRPL16P38064 232 aa6.98□□□□□ -1.29
CUP9YPL177C AIM9P40053 627 aaKnown RBP6.97□□□□□ -1.29
CUP9YPL177C STB3Q12427 513 aa6.97□□□□□ -1.29
CUP9YPL177C MCX1P38323 520 aaPredicted RBP6.96□□□□□ -1.3
CUP9YPL177C LEU1P07264 779 aaKnown RBP6.95□□□□□ -1.3
CUP9YPL177C YNR014WP53719 212 aa6.95□□□□□ -1.3
CUP9YPL177C YMR187CQ03236 431 aa6.95□□□□□ -1.3
CUP9YPL177C MRX10Q05648 414 aa6.95□□□□□ -1.3
CUP9YPL177C RPS6AP0CX37 236 aaKnown RBP6.94□□□□□ -1.3
CUP9YPL177C RPS6BP0CX38 236 aaPredicted RBP6.94□□□□□ -1.3
CUP9YPL177C SPR3P41901 512 aa6.94□□□□□ -1.3
CUP9YPL177C YJL007CP47080 104 aa6.94□□□□□ -1.3
CUP9YPL177C ALD2P47771 506 aa6.94□□□□□ -1.3
CUP9YPL177C MCM1P11746 286 aa6.93□□□□□ -1.3
CUP9YPL177C YNL165WP53891 406 aa6.93□□□□□ -1.3
CUP9YPL177C PDC5P16467 563 aaKnown RBP6.92□□□□□ -1.3
CUP9YPL177C YCK2P23292 546 aaKnown RBP6.92□□□□□ -1.3
CUP9YPL177C KNS1P32350 737 aaPredicted RBP6.92□□□□□ -1.3
CUP9YPL177C TY1A-DR2Q03964 440 aaKnown RBP6.92□□□□□ -1.3
CUP9YPL177C ENO1P00924 437 aaKnown RBP6.91□□□□□ -1.3
CUP9YPL177C BOI2P39969 1040 aa6.91□□□□□ -1.3
CUP9YPL177C YFL034WP43564 1073 aa6.91□□□□□ -1.3
CUP9YPL177C YDR215CQ12240 137 aa6.91□□□□□ -1.3
CUP9YPL177C NTH2P35172 780 aa6.9□□□□□ -1.3
CUP9YPL177C MSC7P38694 644 aa6.9□□□□□ -1.3
CUP9YPL177C NRD1P53617 575 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
CUP9YPL177C BIM1P40013 344 aa6.88□□□□□ -1.31
CUP9YPL177C ATG32P40458 529 aa6.88□□□□□ -1.31
CUP9YPL177C RGP1P16664 663 aa6.87□□□□□ -1.31
CUP9YPL177C PEP12P32854 288 aa6.87□□□□□ -1.31
CUP9YPL177C TAF7Q05021 590 aa6.87□□□□□ -1.31
CUP9YPL177C TIF1P10081 395 aaKnown RBP6.86□□□□□ -1.31
CUP9YPL177C MLF3P32047 452 aa6.86□□□□□ -1.31
CUP9YPL177C MET1P36150 593 aa6.86□□□□□ -1.31
CUP9YPL177C SLN1P39928 1220 aaPredicted RBP6.86□□□□□ -1.31
CUP9YPL177C TSC13Q99190 310 aa6.86□□□□□ -1.31
CUP9YPL177C PDI1P17967 522 aaKnown RBP6.85□□□□□ -1.31
CUP9YPL177C YTA6P40328 754 aa6.84□□□□□ -1.31
CUP9YPL177C CYT1P07143 309 aa6.83□□□□□ -1.32
CUP9YPL177C SBP1P10080 294 aaKnown RBP6.83□□□□□ -1.32
CUP9YPL177C RPP1AP05318 106 aaPredicted RBP6.82□□□□□ -1.32
CUP9YPL177C RTG2P32608 588 aaKnown RBP6.82□□□□□ -1.32
CUP9YPL177C AMN1P38285 549 aaPredicted RBP6.82□□□□□ -1.32
CUP9YPL177C MCA1Q08601 432 aa6.82□□□□□ -1.32
CUP9YPL177C Q0182Q9ZZW1 134 aa6.82□□□□□ -1.32
CUP9YPL177C UBP1P25037 809 aa6.78□□□□□ -1.32
CUP9YPL177C RPL34BP40525 121 aaKnown RBP6.78□□□□□ -1.32
CUP9YPL177C HGH1P48362 394 aaKnown RBP6.78□□□□□ -1.32
CUP9YPL177C ACS2P52910 683 aaKnown RBP6.78□□□□□ -1.32
CUP9YPL177C PRY1P47032 299 aa6.77□□□□□ -1.33
CUP9YPL177C HEH2Q03281 663 aa6.77□□□□□ -1.33
CUP9YPL177C UTP4Q06679 776 aaKnown RBP6.77□□□□□ -1.33
CUP9YPL177C PHO87P25360 923 aa6.76□□□□□ -1.33
CUP9YPL177C TAT1P38085 619 aa6.76□□□□□ -1.33
CUP9YPL177C PRK1P40494 810 aa6.76□□□□□ -1.33
CUP9YPL177C LSB6P42951 607 aa6.76□□□□□ -1.33
CUP9YPL177C SKP1P52286 194 aa6.76□□□□□ -1.33
CUP9YPL177C MTO1P53070 669 aa6.75□□□□□ -1.33
CUP9YPL177C TPS3P38426 1054 aaKnown RBP6.74□□□□□ -1.33
CUP9YPL177C HXT5P38695 592 aa6.74□□□□□ -1.33
CUP9YPL177C KTR7P40504 517 aa6.74□□□□□ -1.33
CUP9YPL177C GAS4Q08271 471 aa6.74□□□□□ -1.33
CUP9YPL177C SCD5P34758 872 aa6.73□□□□□ -1.33
CUP9YPL177C PGM2P37012 569 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 79.8 ms